Origma solitaria
Rockwarbler
GC content
46.76%
Whole genome
Non-coding
1,349 bp
Including the D-loop
Where Rockwarbler sits among 2,335 species
Whole-genome GC content against maximum lifespan. Rockwarbler has the 1,865th longest lifespan of them.
- This species
- Other birds
- Other classes
Base composition
Whole genome16,846 bp
- GC skew (G − C) / (G + C)
- −0.371
- AT skew (A − T) / (A + T)
- +0.101
Life history
- Maximum lifespan
- 7 years
- Adult weight
- 14.4 g
Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 00747)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, small sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,846 bp
Protein-coding11,379 bp
12S rRNA979 bp
16S rRNA1,601 bp
All tRNA1,550 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 978 bp | 49.28% | −0.378 | −0.040 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,040 bp | 49.33% | −0.497 | +0.074 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 48.61% | −0.297 | +0.031 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 48.10% | −0.343 | +0.082 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 45.83% | −0.636 | +0.209 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 47.08% | −0.528 | +0.061 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 50.19% | −0.376 | +0.069 | |||||
| ND3NADH dehydrogenase subunit 3 | 351 bp | 45.58% | −0.450 | +0.089 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 48.49% | −0.417 | +0.020 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 47.39% | −0.556 | +0.126 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,818 bp | 46.98% | −0.499 | +0.145 | |||||
| ND6NADH dehydrogenase subunit 6 | 519 bp | 48.75% | −0.605 | +0.504 | |||||
| CYTBCytochrome b | 1,143 bp | 47.77% | −0.443 | +0.045 | |||||
| 12S rRNA12S ribosomal RNA | 979 bp | 48.01% | −0.123 | +0.187 | |||||
| 16S rRNA16S ribosomal RNA | 1,601 bp | 44.16% | −0.100 | +0.221 |
Codon usage
Counts per codon, darker is more frequent3,797 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.8%
UUU49
UUC173
Leu L17.5%
UUA40
UUG21
CUU50
CUC177
CUA325
CUG53
Ile I7.5%
AUU82
AUC204
Met M4.0%
AUA101
AUG49
Val V5.3%
GUU39
GUC60
GUA78
GUG23
Ser S7.5%
UCU36
UCC117
UCA66
UCG8
AGU7
AGC49
Pro P6.0%
CCU49
CCC75
CCA98
CCG4
Thr T8.4%
ACU45
ACC146
ACA119
ACG8
Ala A8.5%
GCU47
GCC172
GCA88
GCG14
Tyr Y3.0%
UAU21
UAC92
His H2.7%
CAU19
CAC82
Gln Q2.6%
CAA77
CAG20
Asn N3.5%
AAU22
AAC111
Lys K2.2%
AAA78
AAG6
Asp D1.8%
GAU15
GAC53
Glu E2.3%
GAA75
GAG14
Cys C0.8%
UGU9
UGC22
Trp W2.8%
UGA93
UGG13
Arg R1.9%
CGU6
CGC18
CGA38
CGG9
Gly G5.8%
GGU25
GGC73
GGA92
GGG32
Stop 0.3%
UAA6
UAG1
AGA2
AGG1
Genome map
37 annotated features in NC_053100.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 70 | 70 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,048 | 979 bp | + | 48.0% |
| tRNA-Val | Transfer RNA | 1,048 | 1,118 | 71 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,119 | 2,719 | 1,601 bp | + | 44.2% |
| tRNA-Leu (UUR) | Transfer RNA | 2,721 | 2,795 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,819 | 3,796 | 978 bp | + | 49.3% |
| tRNA-Ile | Transfer RNA | 3,811 | 3,883 | 73 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,888 | 3,958 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,963 | 4,031 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,032 | 5,071 | 1,040 bp | + | 49.3% |
| tRNA-Trp | Transfer RNA | 5,072 | 5,141 | 70 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,143 | 5,211 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,221 | 5,293 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,294 | 5,360 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,361 | 5,430 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,432 | 6,982 | 1,551 bp | + | 48.6% |
| tRNA-Ser (UCN) | Transfer RNA | 6,974 | 7,048 | 75 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,054 | 7,122 | 69 bp | + | – |
| COX2 | Protein-coding gene | 7,137 | 7,820 | 684 bp | + | 48.1% |
| tRNA-Lys | Transfer RNA | 7,822 | 7,892 | 71 bp | + | – |
| ATP8 | Protein-coding gene | 7,894 | 8,061 | 168 bp | + | 45.8% |
| ATP6 | Protein-coding gene | 8,052 | 8,735 | 684 bp | + | 47.1% |
| COX3 | Protein-coding gene | 8,741 | 9,525 | 785 bp | + | 50.2% |
| tRNA-Gly | Transfer RNA | 9,525 | 9,593 | 69 bp | + | – |
| ND3 | Protein-coding gene | 9,594 | 9,944 | 351 bp | + | 45.6% |
| tRNA-Arg | Transfer RNA | 9,946 | 10,015 | 70 bp | + | – |
| ND4L | Protein-coding gene | 10,017 | 10,313 | 297 bp | + | 48.5% |
| ND4 | Protein-coding gene | 10,307 | 11,684 | 1,378 bp | + | 47.4% |
| tRNA-His | Transfer RNA | 11,685 | 11,753 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,754 | 11,820 | 67 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,821 | 11,891 | 71 bp | + | – |
| ND5 | Protein-coding gene | 11,892 | 13,709 | 1,818 bp | + | 47.0% |
| CYTB | Protein-coding gene | 13,719 | 14,861 | 1,143 bp | + | 47.8% |
| tRNA-Thr | Transfer RNA | 14,866 | 14,934 | 69 bp | + | – |
| tRNA-Pro | Transfer RNA | 14,945 | 15,014 | 70 bp | − | – |
| ND6 | Protein-coding gene | 15,024 | 15,542 | 519 bp | − | 48.8% |
| tRNA-Glu | Transfer RNA | 15,543 | 15,614 | 72 bp | − | – |