Orthonyx spaldingii
Chowchilla
GC content
46.32%
Whole genome
Non-coding
1,434 bp
Including the D-loop
Where Chowchilla sits among 2,335 species
Whole-genome GC content against maximum lifespan. Chowchilla has the 1,134th longest lifespan of them.
- This species
- Other birds
- Other classes
Base composition
Whole genome16,916 bp
- GC skew (G − C) / (G + C)
- −0.365
- AT skew (A − T) / (A + T)
- +0.118
Life history
- Maximum lifespan
- 16.5 years
- Adult weight
- 145.1 g
Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 01086)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, small sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,916 bp
Protein-coding11,379 bp
12S rRNA981 bp
16S rRNA1,593 bp
All tRNA1,541 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 978 bp | 47.34% | −0.382 | +0.029 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,040 bp | 47.02% | −0.505 | +0.093 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 47.00% | −0.295 | +0.037 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 47.52% | −0.317 | +0.109 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 38.69% | −0.692 | +0.165 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 46.93% | −0.533 | +0.080 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 49.94% | −0.378 | +0.069 | |||||
| ND3NADH dehydrogenase subunit 3 | 351 bp | 46.15% | −0.457 | +0.090 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 49.83% | −0.378 | +0.034 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 48.26% | −0.540 | +0.139 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,818 bp | 44.94% | −0.486 | +0.113 | |||||
| ND6NADH dehydrogenase subunit 6 | 519 bp | 49.13% | −0.537 | +0.576 | |||||
| CYTBCytochrome b | 1,143 bp | 46.89% | −0.433 | +0.041 | |||||
| 12S rRNA12S ribosomal RNA | 981 bp | 48.22% | −0.125 | +0.201 | |||||
| 16S rRNA16S ribosomal RNA | 1,593 bp | 43.38% | −0.085 | +0.235 |
Codon usage
Counts per codon, darker is more frequent3,797 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.0%
UUU59
UUC170
Leu L17.8%
UUA87
UUG18
CUU56
CUC155
CUA303
CUG55
Ile I7.8%
AUU73
AUC225
Met M4.1%
AUA114
AUG42
Val V4.7%
GUU35
GUC57
GUA62
GUG23
Ser S7.3%
UCU35
UCC94
UCA76
UCG14
AGU8
AGC50
Pro P6.1%
CCU30
CCC105
CCA85
CCG12
Thr T8.5%
ACU51
ACC138
ACA123
ACG11
Ala A8.2%
GCU62
GCC140
GCA102
GCG7
Tyr Y2.9%
UAU21
UAC88
His H2.7%
CAU13
CAC90
Gln Q2.4%
CAA82
CAG11
Asn N3.4%
AAU20
AAC109
Lys K2.3%
AAA82
AAG4
Asp D1.8%
GAU14
GAC56
Glu E2.4%
GAA70
GAG22
Cys C0.8%
UGU7
UGC22
Trp W2.8%
UGA93
UGG13
Arg R1.9%
CGU8
CGC15
CGA38
CGG11
Gly G5.8%
GGU24
GGC59
GGA105
GGG33
Stop 0.3%
UAA5
UAG2
AGA1
AGG2
Genome map
37 annotated features in NC_053086.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,049 | 981 bp | + | 48.2% |
| tRNA-Val | Transfer RNA | 1,049 | 1,118 | 70 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,119 | 2,711 | 1,593 bp | + | 43.4% |
| tRNA-Leu (UUR) | Transfer RNA | 2,712 | 2,786 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,808 | 3,785 | 978 bp | + | 47.3% |
| tRNA-Ile | Transfer RNA | 3,795 | 3,865 | 71 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,869 | 3,939 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,939 | 4,007 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,008 | 5,047 | 1,040 bp | + | 47.0% |
| tRNA-Trp | Transfer RNA | 5,048 | 5,118 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,121 | 5,189 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,196 | 5,268 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,270 | 5,336 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,337 | 5,406 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,408 | 6,958 | 1,551 bp | + | 47.0% |
| tRNA-Ser (UCN) | Transfer RNA | 6,950 | 7,024 | 75 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,031 | 7,099 | 69 bp | + | – |
| COX2 | Protein-coding gene | 7,107 | 7,790 | 684 bp | + | 47.5% |
| tRNA-Lys | Transfer RNA | 7,792 | 7,860 | 69 bp | + | – |
| ATP8 | Protein-coding gene | 7,862 | 8,029 | 168 bp | + | 38.7% |
| ATP6 | Protein-coding gene | 8,020 | 8,703 | 684 bp | + | 46.9% |
| COX3 | Protein-coding gene | 8,717 | 9,501 | 785 bp | + | 49.9% |
| tRNA-Gly | Transfer RNA | 9,501 | 9,569 | 69 bp | + | – |
| ND3 | Protein-coding gene | 9,570 | 9,920 | 351 bp | + | 46.2% |
| tRNA-Arg | Transfer RNA | 9,922 | 9,991 | 70 bp | + | – |
| ND4L | Protein-coding gene | 9,993 | 10,289 | 297 bp | + | 49.8% |
| ND4 | Protein-coding gene | 10,283 | 11,660 | 1,378 bp | + | 48.3% |
| tRNA-His | Transfer RNA | 11,661 | 11,730 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,731 | 11,796 | 66 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,796 | 11,866 | 71 bp | + | – |
| ND5 | Protein-coding gene | 11,867 | 13,684 | 1,818 bp | + | 44.9% |
| CYTB | Protein-coding gene | 13,697 | 14,839 | 1,143 bp | + | 46.9% |
| tRNA-Thr | Transfer RNA | 14,861 | 14,929 | 69 bp | + | – |
| tRNA-Pro | Transfer RNA | 14,954 | 15,022 | 69 bp | − | – |
| ND6 | Protein-coding gene | 15,031 | 15,549 | 519 bp | − | 49.1% |
| tRNA-Glu | Transfer RNA | 15,551 | 15,621 | 71 bp | − | – |