Pardalotus punctatus
Spotted pardalote
GC content
46.03%
Whole genome
Non-coding
1,425 bp
Including the D-loop
Where Spotted pardalote sits among 2,335 species
Whole-genome GC content against maximum lifespan. Spotted pardalote has the 2,128th longest lifespan of them.
- This species
- Other birds
- Other classes
Base composition
Whole genome16,919 bp
- GC skew (G − C) / (G + C)
- −0.374
- AT skew (A − T) / (A + T)
- +0.103
Life history
- Maximum lifespan
- 4 years
- Adult weight
- 8.9 g
Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 01103)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,919 bp
Protein-coding11,378 bp
12S rRNA983 bp
16S rRNA1,602 bp
All tRNA1,543 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 978 bp | 48.26% | −0.373 | −0.016 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,040 bp | 46.35% | −0.523 | +0.118 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 47.39% | −0.322 | +0.054 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 48.68% | −0.393 | +0.123 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 43.45% | −0.671 | +0.200 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 46.35% | −0.546 | +0.095 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 49.05% | −0.371 | +0.020 | |||||
| ND3NADH dehydrogenase subunit 3 | 350 bp | 44.86% | −0.490 | +0.078 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 48.15% | −0.455 | +0.026 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 46.66% | −0.549 | +0.110 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,818 bp | 46.21% | −0.488 | +0.129 | |||||
| ND6NADH dehydrogenase subunit 6 | 519 bp | 49.33% | −0.555 | +0.475 | |||||
| CYTBCytochrome b | 1,143 bp | 46.46% | −0.458 | +0.069 | |||||
| 12S rRNA12S ribosomal RNA | 983 bp | 48.53% | −0.128 | +0.209 | |||||
| 16S rRNA16S ribosomal RNA | 1,602 bp | 43.76% | −0.124 | +0.245 |
Codon usage
Counts per codon, darker is more frequent3,796 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.9%
UUU42
UUC182
Leu L17.6%
UUA49
UUG20
CUU68
CUC163
CUA319
CUG48
Ile I7.8%
AUU89
AUC206
Met M4.1%
AUA120
AUG36
Val V5.0%
GUU35
GUC71
GUA69
GUG15
Ser S7.6%
UCU33
UCC98
UCA89
UCG9
AGU11
AGC47
Pro P5.9%
CCU36
CCC84
CCA101
CCG2
Thr T8.3%
ACU51
ACC137
ACA122
ACG6
Ala A8.2%
GCU37
GCC159
GCA100
GCG15
Tyr Y3.0%
UAU29
UAC84
His H2.6%
CAU17
CAC81
Gln Q2.7%
CAA96
CAG8
Asn N3.5%
AAU21
AAC111
Lys K2.2%
AAA83
AAG1
Asp D1.7%
GAU11
GAC55
Glu E2.3%
GAA76
GAG10
Cys C0.8%
UGU7
UGC23
Trp W2.8%
UGA94
UGG12
Arg R1.9%
CGU8
CGC18
CGA39
CGG6
Gly G6.0%
GGU31
GGC75
GGA89
GGG33
Stop 0.2%
UAA5
UAG1
AGA2
AGG1
Genome map
37 annotated features in NC_053099.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 68 | 1,050 | 983 bp | + | 48.5% |
| tRNA-Val | Transfer RNA | 1,050 | 1,119 | 70 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,120 | 2,721 | 1,602 bp | + | 43.8% |
| tRNA-Leu (UUR) | Transfer RNA | 2,722 | 2,796 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,822 | 3,799 | 978 bp | + | 48.3% |
| tRNA-Ile | Transfer RNA | 3,811 | 3,882 | 72 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,887 | 3,957 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,963 | 4,031 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,032 | 5,071 | 1,040 bp | + | 46.4% |
| tRNA-Trp | Transfer RNA | 5,072 | 5,141 | 70 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,143 | 5,211 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,223 | 5,295 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,297 | 5,363 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,364 | 5,433 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,435 | 6,985 | 1,551 bp | + | 47.4% |
| tRNA-Ser (UCN) | Transfer RNA | 6,977 | 7,051 | 75 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,057 | 7,125 | 69 bp | + | – |
| COX2 | Protein-coding gene | 7,140 | 7,823 | 684 bp | + | 48.7% |
| tRNA-Lys | Transfer RNA | 7,825 | 7,894 | 70 bp | + | – |
| ATP8 | Protein-coding gene | 7,896 | 8,063 | 168 bp | + | 43.5% |
| ATP6 | Protein-coding gene | 8,054 | 8,737 | 684 bp | + | 46.4% |
| COX3 | Protein-coding gene | 8,742 | 9,526 | 785 bp | + | 49.1% |
| tRNA-Gly | Transfer RNA | 9,526 | 9,594 | 69 bp | + | – |
| ND3 | Protein-coding gene | 9,595 | 9,944 | 350 bp | + | 44.9% |
| tRNA-Arg | Transfer RNA | 9,945 | 10,014 | 70 bp | + | – |
| ND4L | Protein-coding gene | 10,016 | 10,312 | 297 bp | + | 48.2% |
| ND4 | Protein-coding gene | 10,306 | 11,683 | 1,378 bp | + | 46.7% |
| tRNA-His | Transfer RNA | 11,684 | 11,752 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,753 | 11,818 | 66 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,818 | 11,888 | 71 bp | + | – |
| ND5 | Protein-coding gene | 11,889 | 13,706 | 1,818 bp | + | 46.2% |
| CYTB | Protein-coding gene | 13,717 | 14,859 | 1,143 bp | + | 46.5% |
| tRNA-Thr | Transfer RNA | 14,863 | 14,931 | 69 bp | + | – |
| tRNA-Pro | Transfer RNA | 14,940 | 15,009 | 70 bp | − | – |
| ND6 | Protein-coding gene | 15,020 | 15,538 | 519 bp | − | 49.3% |
| tRNA-Glu | Transfer RNA | 15,539 | 15,610 | 72 bp | − | – |