MitoAge

Dicotyles tajacu

Collared peccary

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Maximum lifespan
31.5 yr
AnAge record
mtDNA size
16,839 bp
RefSeq NC_012103.1
GC content
40.47%
Whole genome
Non-coding
1,467 bp
Including the D-loop

Where Collared peccary sits among 2,335 species

Whole-genome GC content against maximum lifespan. Collared peccary has the 407th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Collared peccary
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,839 bp
GC skew (G − C) / (G + C)
−0.335
AT skew (A − T) / (A + T)
+0.150

Life history

Maximum lifespan
31.5 years
Adult weight
20.2 kg
Birth weight
700 g
Basal metabolic rate
33.165 W
Body temperature
37.5 °C
Female sexual maturity
329 days
Male sexual maturity
358 days
Gestation or incubation
145 days
Litter or clutch size
2
Litters per year
2

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02063)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
high, large sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Renamed in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)
Earlier name
Pecari tajacu

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,839 bp
Protein-coding11,354 bp
12S rRNA951 bp
16S rRNA1,574 bp
All tRNA1,508 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1957 bp33.2%26.2%12.5%28.0%40.54%−0.381+0.118
ND2NADH dehydrogenase subunit 21,044 bp38.4%23.3%9.3%29.0%38.31%−0.515+0.245
COX1Cytochrome c oxidase subunit I1,545 bp29.1%29.0%16.7%25.2%41.88%−0.202+0.002
COX2Cytochrome c oxidase subunit II696 bp34.6%25.6%13.5%26.3%39.80%−0.321+0.150
ATP8ATP synthase F0 subunit 8204 bp41.2%23.0%8.3%27.5%35.78%−0.534+0.282
ATP6ATP synthase F0 subunit 6681 bp33.8%24.1%10.9%31.3%42.14%−0.484+0.168
COX3Cytochrome c oxidase subunit III784 bp28.1%26.4%15.3%30.2%45.54%−0.328+0.030
ND3NADH dehydrogenase subunit 3347 bp33.1%25.6%11.2%30.0%41.21%−0.455+0.127
ND4LNADH dehydrogenase subunit 4L297 bp32.7%28.6%12.1%26.6%38.72%−0.374+0.066
ND4NADH dehydrogenase subunit 41,378 bp33.8%25.8%10.7%29.7%40.35%−0.471+0.134
ND5NADH dehydrogenase subunit 51,821 bp34.6%25.6%10.4%29.4%39.76%−0.478+0.149
ND6NADH dehydrogenase subunit 6528 bp43.8%19.9%6.8%29.5%36.36%−0.625+0.375
CYTBCytochrome b1,140 bp31.6%25.2%12.6%30.6%43.25%−0.416+0.113
12S rRNA12S ribosomal RNA951 bp37.5%21.7%17.4%23.4%40.80%−0.149+0.268
16S rRNA16S ribosomal RNA1,574 bp38.3%22.6%16.9%22.2%39.14%−0.136+0.259

Codon usage

Counts per codon, darker is more frequent

3,806 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.9%
UUU90
UUC134
Leu L15.6%
UUA65
UUG17
CUU53
CUC91
CUA327
CUG42
Ile I8.5%
AUU141
AUC184
Met M6.6%
AUA216
AUG37
Val V4.9%
GUU24
GUC29
GUA112
GUG23
Ser S7.5%
UCU36
UCC72
UCA120
UCG6
AGU11
AGC42
Pro P5.1%
CCU29
CCC58
CCA102
CCG6
Thr T8.6%
ACU46
ACC93
ACA179
ACG10
Ala A6.5%
GCU33
GCC100
GCA111
GCG4
Tyr Y3.5%
UAU61
UAC73
His H2.6%
CAU22
CAC78
Gln Q2.4%
CAA80
CAG10
Asn N4.2%
AAU44
AAC114
Lys K2.6%
AAA93
AAG6
Asp D1.8%
GAU23
GAC45
Glu E2.5%
GAA80
GAG17
Cys C0.6%
UGU8
UGC16
Trp W2.8%
UGA100
UGG5
Arg R1.7%
CGU6
CGC11
CGA46
CGG2
Gly G5.6%
GGU27
GGC53
GGA106
GGG27
Stop 0.3%
UAA5
UAG3
AGA2
AGG0

Genome map

37 annotated features in NC_012103.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (40.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA17070 bp+–
12S rRNARibosomal RNA701,020951 bp+40.8%
tRNA-ValTransfer RNA1,0201,08768 bp+–
16S rRNARibosomal RNA1,0882,6611,574 bp+39.1%
tRNA-Leu (UUR)Transfer RNA2,6612,73575 bp+–
ND1Protein-coding gene2,7383,694957 bp+40.5%
tRNA-IleTransfer RNA3,6933,76270 bp+–
tRNA-GlnTransfer RNA3,7603,83273 bp−–
tRNA-MetTransfer RNA3,8333,90270 bp+–
ND2Protein-coding gene3,9034,9461,044 bp+38.3%
tRNA-TrpTransfer RNA4,9455,01268 bp+–
tRNA-AlaTransfer RNA5,0185,08568 bp−–
tRNA-AsnTransfer RNA5,0945,16774 bp−–
tRNA-CysTransfer RNA5,2005,26667 bp−–
tRNA-TyrTransfer RNA5,2665,33368 bp−–
COX1Protein-coding gene5,3356,8791,545 bp+41.9%
tRNA-Ser (UCN)Transfer RNA6,8836,95169 bp−–
tRNA-AspTransfer RNA6,9587,02669 bp+–
COX2Protein-coding gene7,0277,722696 bp+39.8%
tRNA-LysTransfer RNA7,7157,78167 bp+–
ATP8Protein-coding gene7,7837,986204 bp+35.8%
ATP6Protein-coding gene7,9448,624681 bp+42.1%
COX3Protein-coding gene8,6249,407784 bp+45.5%
tRNA-GlyTransfer RNA9,4089,47568 bp+–
ND3Protein-coding gene9,4779,823347 bp+41.2%
tRNA-ArgTransfer RNA9,8249,89168 bp+–
ND4LProtein-coding gene9,89210,188297 bp+38.7%
ND4Protein-coding gene10,18211,5591,378 bp+40.4%
tRNA-HisTransfer RNA11,56011,62768 bp+–
tRNA-Ser (AGY)Transfer RNA11,62811,68659 bp+–
tRNA-Leu (CUN)Transfer RNA11,68711,75670 bp+–
ND5Protein-coding gene11,75713,5771,821 bp+39.8%
ND6Protein-coding gene13,56114,088528 bp−36.4%
tRNA-GluTransfer RNA14,08914,15769 bp−–
CYTBProtein-coding gene14,16215,3011,140 bp+43.3%
tRNA-ThrTransfer RNA15,30215,37170 bp+–
tRNA-ProTransfer RNA15,37115,43565 bp−–

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