MitoAge

Phacochoerus africanus

Wart hog

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Maximum lifespan
30 yr
AnAge record
mtDNA size
16,719 bp
RefSeq NC_008830.1
GC content
39.25%
Whole genome
Non-coding
1,333 bp
D-loop 1,276 bp

Where Wart hog sits among 2,335 species

Whole-genome GC content against maximum lifespan. Wart hog has the 449th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Wart hog
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,719 bp
GC skew (G − C) / (G + C)
−0.323
AT skew (A − T) / (A + T)
+0.139

Life history

Maximum lifespan
30 years
Adult weight
100 kg
Birth weight
660 g
Female sexual maturity
578 days
Male sexual maturity
578 days
Gestation or incubation
164 days
Litter or clutch size
3
Litters per year
1.5

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02055)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, large sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,719 bp
Protein-coding11,342 bp
12S rRNA963 bp
16S rRNA1,572 bp
All tRNA1,509 bp
D-loop1,276 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1955 bp32.9%24.8%12.0%30.3%42.30%−0.431+0.140
ND2NADH dehydrogenase subunit 21,042 bp39.3%24.6%8.8%27.3%36.08%−0.511+0.231
COX1Cytochrome c oxidase subunit I1,545 bp29.8%29.0%16.5%24.7%41.17%−0.198+0.014
COX2Cytochrome c oxidase subunit II688 bp34.3%25.7%14.0%26.0%39.97%−0.302+0.143
ATP8ATP synthase F0 subunit 8204 bp42.6%28.4%5.9%23.0%28.92%−0.593+0.200
ATP6ATP synthase F0 subunit 6681 bp33.9%27.9%10.1%28.0%38.18%−0.469+0.097
COX3Cytochrome c oxidase subunit III784 bp28.7%27.4%15.6%28.3%43.88%−0.291+0.023
ND3NADH dehydrogenase subunit 3347 bp35.2%25.9%11.5%27.4%38.91%−0.407+0.151
ND4LNADH dehydrogenase subunit 4L297 bp31.3%34.0%12.1%22.6%34.68%−0.301−0.041
ND4NADH dehydrogenase subunit 41,378 bp33.7%27.3%10.4%28.6%38.97%−0.467+0.106
ND5NADH dehydrogenase subunit 51,821 bp34.6%26.2%11.0%28.2%39.15%−0.439+0.137
ND6NADH dehydrogenase subunit 6528 bp44.9%20.1%7.2%27.8%35.04%−0.589+0.382
CYTBCytochrome b1,140 bp32.4%26.5%12.4%28.8%41.14%−0.399+0.100
12S rRNA12S ribosomal RNA963 bp36.7%23.3%17.3%22.7%40.08%−0.135+0.224
16S rRNA16S ribosomal RNA1,572 bp38.6%24.6%16.6%20.2%36.77%−0.097+0.221
D-loopControl region (D-loop)1,276 bp32.4%25.5%15.5%26.6%42.16%−0.264+0.119

Codon usage

Counts per codon, darker is more frequent

3,801 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%
UUU90
UUC138
Leu L15.3%
UUA100
UUG14
CUU56
CUC68
CUA314
CUG29
Ile I8.5%
AUU151
AUC173
Met M7.3%
AUA239
AUG38
Val V4.9%
GUU30
GUC29
GUA110
GUG17
Ser S7.5%
UCU39
UCC75
UCA109
UCG6
AGU11
AGC44
Pro P5.0%
CCU27
CCC67
CCA94
CCG1
Thr T8.1%
ACU54
ACC72
ACA174
ACG9
Ala A6.7%
GCU41
GCC94
GCA115
GCG3
Tyr Y3.6%
UAU59
UAC79
His H2.7%
CAU29
CAC74
Gln Q2.3%
CAA84
CAG4
Asn N4.2%
AAU54
AAC107
Lys K2.6%
AAA89
AAG10
Asp D1.7%
GAU24
GAC41
Glu E2.6%
GAA83
GAG15
Cys C0.7%
UGU6
UGC20
Trp W2.7%
UGA98
UGG6
Arg R1.7%
CGU8
CGC9
CGA45
CGG3
Gly G5.7%
GGU39
GGC46
GGA104
GGG27
Stop 0.2%
UAA5
UAG1
AGA1
AGG0

Genome map

38 annotated features in NC_008830.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.2%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
D-loopControl region11,2761,276 bp–42.2%
tRNA-PheTransfer RNA1,2771,34670 bp+–
12S rRNARibosomal RNA1,3472,309963 bp+40.1%
tRNA-ValTransfer RNA2,3102,37768 bp+–
16S rRNARibosomal RNA2,3783,9491,572 bp+36.8%
tRNA-Leu (UUR)Transfer RNA3,9504,02475 bp+–
ND1Protein-coding gene4,0274,981955 bp+42.3%
tRNA-IleTransfer RNA4,9825,05069 bp+–
tRNA-GlnTransfer RNA5,0485,12073 bp−–
tRNA-MetTransfer RNA5,1225,19170 bp+–
ND2Protein-coding gene5,1926,2331,042 bp+36.1%
tRNA-TrpTransfer RNA6,2346,30168 bp+–
tRNA-AlaTransfer RNA6,3086,37568 bp−–
tRNA-AsnTransfer RNA6,3776,45175 bp−–
tRNA-CysTransfer RNA6,4846,55067 bp−–
tRNA-TyrTransfer RNA6,5506,61667 bp−–
COX1Protein-coding gene6,6188,1621,545 bp+41.2%
tRNA-Ser (UCN)Transfer RNA8,1668,23671 bp+–
tRNA-AspTransfer RNA8,2438,30967 bp+–
COX2Protein-coding gene8,3108,997688 bp+40.0%
tRNA-LysTransfer RNA8,9989,06467 bp+–
ATP8Protein-coding gene9,0669,269204 bp+28.9%
ATP6Protein-coding gene9,2279,907681 bp+38.2%
COX3Protein-coding gene9,90710,690784 bp+43.9%
tRNA-GlyTransfer RNA10,69110,75969 bp+–
ND3Protein-coding gene10,76011,106347 bp+38.9%
tRNA-ArgTransfer RNA11,10711,17569 bp+–
ND4LProtein-coding gene11,17611,472297 bp+34.7%
ND4Protein-coding gene11,46612,8431,378 bp+39.0%
tRNA-HisTransfer RNA12,84412,91269 bp+–
tRNA-Ser (AGY)Transfer RNA12,91312,97159 bp+–
tRNA-Leu (CUN)Transfer RNA12,97213,04170 bp+–
ND5Protein-coding gene13,04214,8621,821 bp+39.2%
ND6Protein-coding gene14,84615,373528 bp−35.0%
tRNA-GluTransfer RNA15,37415,44269 bp+–
CYTBProtein-coding gene15,44716,5861,140 bp+41.1%
tRNA-ThrTransfer RNA16,58716,65468 bp+–
tRNA-ProTransfer RNA16,65516,71965 bp−–

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