MitoAge

Phylloscopus collybita

Common chiffchaff, or Eurasian chiffchaff

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Maximum lifespan
8 yr
AnAge record
mtDNA size
16,936 bp
RefSeq NC_060852.1
GC content
45.71%
Whole genome
Non-coding
1,451 bp
D-loop 1,366 bp

Where Common chiffchaff, or Eurasian chiffchaff sits among 2,335 species

Whole-genome GC content against maximum lifespan. Common chiffchaff, or Eurasian chiffchaff has the 1,738th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Common chiffchaff, or Eurasian chiffchaff
  • This species
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Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,936 bp
GC skew (G − C) / (G + C)
−0.383
AT skew (A − T) / (A + T)
+0.112

Life history

Maximum lifespan
8 years
Adult weight
8.3 g
Basal metabolic rate
0.165 W
Female sexual maturity
365 days
Male sexual maturity
365 days
Postnatal growth rate
0.498 per day

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 01220)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,936 bp
Protein-coding11,377 bp
12S rRNA977 bp
16S rRNA1,600 bp
All tRNA1,540 bp
D-loop1,366 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1978 bp26.9%26.6%13.9%32.6%46.52%−0.402+0.006
ND2NADH dehydrogenase subunit 21,040 bp30.6%26.0%9.6%33.8%43.46%−0.558+0.082
COX1Cytochrome c oxidase subunit I1,551 bp27.7%24.8%16.6%30.8%47.45%−0.299+0.055
COX2Cytochrome c oxidase subunit II684 bp30.1%24.0%14.5%31.4%45.91%−0.369+0.114
ATP8ATP synthase F0 subunit 8168 bp34.5%23.2%6.0%36.3%42.26%−0.718+0.196
ATP6ATP synthase F0 subunit 6684 bp29.8%24.0%10.1%36.1%46.20%−0.563+0.109
COX3Cytochrome c oxidase subunit III784 bp25.3%25.1%16.2%33.4%49.62%−0.347+0.003
ND3NADH dehydrogenase subunit 3351 bp29.1%27.6%12.3%31.1%43.31%−0.434+0.025
ND4LNADH dehydrogenase subunit 4L297 bp28.3%24.6%12.1%35.0%47.14%−0.486+0.070
ND4NADH dehydrogenase subunit 41,378 bp31.0%23.9%10.2%34.8%45.07%−0.546+0.128
ND5NADH dehydrogenase subunit 51,818 bp31.6%23.4%11.5%33.4%44.94%−0.488+0.149
ND6NADH dehydrogenase subunit 6519 bp39.7%14.5%8.3%37.6%45.86%−0.639+0.466
CYTBCytochrome b1,142 bp28.9%24.5%12.6%34.0%46.59%−0.459+0.082
12S rRNA12S ribosomal RNA977 bp30.1%20.0%22.1%27.8%49.95%−0.115+0.202
16S rRNA16S ribosomal RNA1,600 bp34.1%21.8%19.9%24.2%44.06%−0.098+0.220
D-loopControl region (D-loop)1,366 bp25.9%27.1%13.0%34.0%47.00%−0.445−0.022

Codon usage

Counts per codon, darker is more frequent

3,796 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.8%
UUU65
UUC157
Leu L17.7%
UUA86
UUG17
CUU58
CUC148
CUA330
CUG31
Ile I7.8%
AUU80
AUC215
Met M4.2%
AUA114
AUG46
Val V4.7%
GUU26
GUC55
GUA81
GUG18
Ser S7.3%
UCU54
UCC77
UCA80
UCG8
AGU6
AGC52
Pro P6.0%
CCU27
CCC75
CCA117
CCG7
Thr T8.4%
ACU74
ACC124
ACA118
ACG4
Ala A8.5%
GCU69
GCC140
GCA103
GCG9
Tyr Y3.0%
UAU21
UAC92
His H2.8%
CAU13
CAC94
Gln Q2.5%
CAA88
CAG7
Asn N3.3%
AAU14
AAC113
Lys K2.3%
AAA84
AAG4
Asp D1.8%
GAU13
GAC54
Glu E2.3%
GAA80
GAG8
Cys C0.8%
UGU5
UGC25
Trp W2.8%
UGA103
UGG4
Arg R1.9%
CGU8
CGC15
CGA47
CGG4
Gly G5.8%
GGU26
GGC75
GGA89
GGG30
Stop 0.2%
UAA5
UAG2
AGA1
AGG1

Genome map

39 annotated features in NC_060852.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop2
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (45.7%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 39 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA691,045977 bp+50.0%
tRNA-ValTransfer RNA1,0461,11570 bp+–
16S rRNARibosomal RNA1,1162,7151,600 bp+44.1%
tRNA-Leu (UUR)Transfer RNA2,7162,79075 bp+–
ND1Protein-coding gene2,8123,789978 bp+46.5%
tRNA-IleTransfer RNA3,7973,86973 bp+–
tRNA-GlnTransfer RNA3,8753,94571 bp−–
tRNA-MetTransfer RNA3,9454,01369 bp+–
ND2Protein-coding gene4,0145,0531,040 bp+43.5%
tRNA-TrpTransfer RNA5,0545,12370 bp+–
tRNA-AlaTransfer RNA5,1255,19470 bp−–
tRNA-AsnTransfer RNA5,2055,27773 bp−–
tRNA-CysTransfer RNA5,2805,34667 bp−–
tRNA-TyrTransfer RNA5,3465,41671 bp−–
COX1Protein-coding gene5,4186,9681,551 bp+47.5%
tRNA-Ser (UCN)Transfer RNA6,9607,03273 bp−–
tRNA-AspTransfer RNA7,0377,10569 bp+–
COX2Protein-coding gene7,1147,797684 bp+45.9%
tRNA-LysTransfer RNA7,7997,86567 bp+–
ATP8Protein-coding gene7,8678,034168 bp+42.3%
ATP6Protein-coding gene8,0258,708684 bp+46.2%
COX3Protein-coding gene8,7149,497784 bp+49.6%
tRNA-GlyTransfer RNA9,4989,56669 bp+–
ND3Protein-coding gene9,5679,917351 bp+43.3%
tRNA-ArgTransfer RNA9,9199,98870 bp+–
ND4LProtein-coding gene9,99010,286297 bp+47.1%
ND4Protein-coding gene10,28011,6571,378 bp+45.1%
tRNA-HisTransfer RNA11,65811,72770 bp+–
tRNA-Ser (AGY)Transfer RNA11,72811,79366 bp+–
tRNA-Leu (CUN)Transfer RNA11,79311,86371 bp+–
ND5Protein-coding gene11,86413,6811,818 bp+44.9%
CYTBProtein-coding gene13,68914,8301,142 bp+46.6%
tRNA-ThrTransfer RNA14,83114,89969 bp+–
D-loopControl region14,90015,9931,094 bp–47.0%
tRNA-ProTransfer RNA15,99416,06269 bp−–
ND6Protein-coding gene16,07316,591519 bp−45.9%
tRNA-GluTransfer RNA16,59216,66473 bp−–
D-loopControl region16,66516,936272 bp–47.0%

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