Pica hudsonia
Black-billed magpie
GC content
43.45%
Whole genome
Non-coding
1,450 bp
D-loop 1,361 bp
Where Black-billed magpie sits among 2,335 species
Whole-genome GC content against maximum lifespan. Black-billed magpie has the 938th longest lifespan of them.
- This species
- Other birds
- Other classes
Base composition
Whole genome16,945 bp
- GC skew (G − C) / (G + C)
- −0.357
- AT skew (A − T) / (A + T)
- +0.100
Life history
- Maximum lifespan
- 20 years
- Adult weight
- 177 g
- Basal metabolic rate
- 1.196 W
- Female sexual maturity
- 365 days
- Male sexual maturity
- 2 years
- Gestation or incubation
- 18 days
- Litter or clutch size
- 6.5
- Litters per year
- 1
Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 00839)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in captivity
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,945 bp
Protein-coding11,382 bp
12S rRNA980 bp
16S rRNA1,603 bp
All tRNA1,541 bp
D-loop1,361 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 978 bp | 43.87% | −0.394 | +0.020 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,041 bp | 44.28% | −0.510 | +0.076 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 45.52% | −0.269 | +0.034 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 44.30% | −0.294 | +0.092 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 40.48% | −0.706 | +0.140 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 41.67% | −0.558 | +0.113 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 46.56% | −0.353 | +0.041 | |||||
| ND3NADH dehydrogenase subunit 3 | 351 bp | 43.02% | −0.430 | +0.030 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 46.80% | −0.424 | −0.038 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 42.09% | −0.517 | +0.125 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,818 bp | 43.12% | −0.474 | +0.095 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 44.25% | −0.532 | +0.409 | |||||
| CYTBCytochrome b | 1,143 bp | 44.09% | −0.444 | +0.045 | |||||
| 12S rRNA12S ribosomal RNA | 980 bp | 47.45% | −0.118 | +0.184 | |||||
| 16S rRNA16S ribosomal RNA | 1,603 bp | 43.17% | −0.072 | +0.212 | |||||
| D-loopControl region (D-loop) | 1,361 bp | 40.34% | −0.395 | −0.030 |
Codon usage
Counts per codon, darker is more frequent3,799 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.9%
UUU71
UUC155
Leu L17.2%
UUA73
UUG7
CUU71
CUC109
CUA364
CUG31
Ile I7.8%
AUU110
AUC186
Met M4.4%
AUA123
AUG45
Val V5.3%
GUU49
GUC51
GUA85
GUG18
Ser S7.6%
UCU56
UCC84
UCA91
UCG1
AGU13
AGC45
Pro P5.8%
CCU51
CCC52
CCA115
CCG4
Thr T8.3%
ACU72
ACC113
ACA127
ACG3
Ala A7.8%
GCU54
GCC126
GCA111
GCG6
Tyr Y2.9%
UAU37
UAC72
His H2.8%
CAU29
CAC77
Gln Q2.6%
CAA91
CAG9
Asn N3.6%
AAU36
AAC100
Lys K2.2%
AAA79
AAG5
Asp D1.8%
GAU15
GAC53
Glu E2.4%
GAA75
GAG15
Cys C0.7%
UGU7
UGC20
Trp W2.8%
UGA100
UGG7
Arg R1.8%
CGU10
CGC11
CGA42
CGG7
Gly G5.8%
GGU25
GGC68
GGA102
GGG24
Stop 0.3%
UAA8
UAG0
AGA1
AGG2
Genome map
38 annotated features in NC_072703.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (43.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,048 | 980 bp | + | 47.5% |
| tRNA-Val | Transfer RNA | 1,048 | 1,117 | 70 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,118 | 2,720 | 1,603 bp | + | 43.2% |
| tRNA-Leu (UUR) | Transfer RNA | 2,721 | 2,795 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,805 | 3,782 | 978 bp | + | 43.9% |
| tRNA-Ile | Transfer RNA | 3,790 | 3,862 | 73 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,868 | 3,938 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,938 | 4,006 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,007 | 5,047 | 1,041 bp | + | 44.3% |
| tRNA-Trp | Transfer RNA | 5,052 | 5,121 | 70 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,123 | 5,191 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,198 | 5,271 | 74 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,273 | 5,339 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,340 | 5,409 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,411 | 6,961 | 1,551 bp | + | 45.5% |
| tRNA-Ser (UCN) | Transfer RNA | 6,953 | 7,025 | 73 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,030 | 7,098 | 69 bp | + | – |
| COX2 | Protein-coding gene | 7,107 | 7,790 | 684 bp | + | 44.3% |
| tRNA-Lys | Transfer RNA | 7,792 | 7,861 | 70 bp | + | – |
| ATP8 | Protein-coding gene | 7,863 | 8,030 | 168 bp | + | 40.5% |
| ATP6 | Protein-coding gene | 8,021 | 8,704 | 684 bp | + | 41.7% |
| COX3 | Protein-coding gene | 8,712 | 9,495 | 784 bp | + | 46.6% |
| tRNA-Gly | Transfer RNA | 9,496 | 9,564 | 69 bp | + | – |
| ND3 | Protein-coding gene | 9,565 | 9,915 | 351 bp | + | 43.0% |
| tRNA-Arg | Transfer RNA | 9,917 | 9,986 | 70 bp | + | – |
| ND4L | Protein-coding gene | 9,988 | 10,284 | 297 bp | + | 46.8% |
| ND4 | Protein-coding gene | 10,278 | 11,655 | 1,378 bp | + | 42.1% |
| tRNA-His | Transfer RNA | 11,656 | 11,724 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,725 | 11,790 | 66 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,790 | 11,860 | 71 bp | + | – |
| ND5 | Protein-coding gene | 11,861 | 13,678 | 1,818 bp | + | 43.1% |
| CYTB | Protein-coding gene | 13,688 | 14,830 | 1,143 bp | + | 44.1% |
| tRNA-Thr | Transfer RNA | 14,834 | 14,901 | 68 bp | + | – |
| tRNA-Pro | Transfer RNA | 14,912 | 14,981 | 70 bp | − | – |
| ND6 | Protein-coding gene | 14,991 | 15,512 | 522 bp | − | 44.3% |
| tRNA-Glu | Transfer RNA | 15,514 | 15,584 | 71 bp | − | – |
| D-loop | Control region | 15,585 | 16,945 | 1,361 bp | – | 40.3% |