Pica pica
Eurasian magpie
GC content
43.39%
Whole genome
Non-coding
1,443 bp
D-loop 1,354 bp
Where Eurasian magpie sits among 2,335 species
Whole-genome GC content against maximum lifespan. Eurasian magpie has the 816th longest lifespan of them.
- This species
- Other birds
- Other classes
Base composition
Whole genome16,939 bp
- GC skew (G − C) / (G + C)
- −0.349
- AT skew (A − T) / (A + T)
- +0.097
Life history
- Maximum lifespan
- 21.7 years
- Adult weight
- 178 g
- Female sexual maturity
- 2 years
- Male sexual maturity
- 2 years
- Gestation or incubation
- 21 days
- Postnatal growth rate
- 0.293 per day
Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 00841)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- Updated in build 2
- In the database since
- build 1 (2015-07-01)
- Last changed
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,939 bp
Protein-coding11,381 bp
12S rRNA979 bp
16S rRNA1,603 bp
All tRNA1,542 bp
D-loop1,354 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 978 bp | 43.56% | −0.394 | +0.014 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,040 bp | 44.04% | −0.528 | +0.079 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 45.65% | −0.277 | +0.046 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 43.13% | −0.288 | +0.075 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 38.10% | −0.719 | +0.135 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 41.08% | −0.523 | +0.072 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 46.17% | −0.354 | +0.024 | |||||
| ND3NADH dehydrogenase subunit 3 | 351 bp | 43.31% | −0.395 | +0.015 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 46.80% | −0.439 | −0.025 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 43.11% | −0.492 | +0.115 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,818 bp | 43.62% | −0.453 | +0.093 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 45.59% | −0.555 | +0.451 | |||||
| CYTBCytochrome b | 1,143 bp | 43.83% | −0.421 | +0.034 | |||||
| 12S rRNA12S ribosomal RNA | 979 bp | 47.40% | −0.108 | +0.177 | |||||
| 16S rRNA16S ribosomal RNA | 1,603 bp | 43.17% | −0.069 | +0.214 | |||||
| D-loopControl region (D-loop) | 1,354 bp | 39.00% | −0.394 | −0.010 |
Codon usage
Counts per codon, darker is more frequent3,798 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.0%
UUU64
UUC162
Leu L17.2%
UUA75
UUG8
CUU73
CUC108
CUA348
CUG41
Ile I7.8%
AUU121
AUC177
Met M4.3%
AUA128
AUG37
Val V5.5%
GUU54
GUC51
GUA88
GUG16
Ser S7.6%
UCU49
UCC89
UCA92
UCG3
AGU14
AGC43
Pro P5.8%
CCU49
CCC58
CCA110
CCG4
Thr T8.1%
ACU72
ACC104
ACA129
ACG4
Ala A7.9%
GCU59
GCC122
GCA109
GCG9
Tyr Y2.9%
UAU40
UAC69
His H2.8%
CAU26
CAC80
Gln Q2.6%
CAA92
CAG8
Asn N3.6%
AAU39
AAC96
Lys K2.2%
AAA80
AAG4
Asp D1.8%
GAU21
GAC48
Glu E2.4%
GAA73
GAG17
Cys C0.7%
UGU4
UGC23
Trp W2.8%
UGA97
UGG10
Arg R1.9%
CGU10
CGC11
CGA44
CGG6
Gly G5.8%
GGU26
GGC66
GGA95
GGG33
Stop 0.3%
UAA7
UAG0
AGA1
AGG2
Genome map
38 annotated features in NC_015200.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (43.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,048 | 979 bp | + | 47.4% |
| tRNA-Val | Transfer RNA | 1,049 | 1,118 | 70 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,119 | 2,721 | 1,603 bp | + | 43.2% |
| tRNA-Leu (UUR) | Transfer RNA | 2,722 | 2,796 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,806 | 3,783 | 978 bp | + | 43.6% |
| tRNA-Ile | Transfer RNA | 3,791 | 3,863 | 73 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,869 | 3,939 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,939 | 4,007 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,008 | 5,047 | 1,040 bp | + | 44.0% |
| tRNA-Trp | Transfer RNA | 5,052 | 5,121 | 70 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,123 | 5,191 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,198 | 5,271 | 74 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,273 | 5,339 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,339 | 5,409 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,411 | 6,961 | 1,551 bp | + | 45.7% |
| tRNA-Ser (UCN) | Transfer RNA | 6,953 | 7,025 | 73 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,030 | 7,099 | 70 bp | + | – |
| COX2 | Protein-coding gene | 7,108 | 7,791 | 684 bp | + | 43.1% |
| tRNA-Lys | Transfer RNA | 7,793 | 7,862 | 70 bp | + | – |
| ATP8 | Protein-coding gene | 7,864 | 8,031 | 168 bp | + | 38.1% |
| ATP6 | Protein-coding gene | 8,022 | 8,705 | 684 bp | + | 41.1% |
| COX3 | Protein-coding gene | 8,713 | 9,496 | 784 bp | + | 46.2% |
| tRNA-Gly | Transfer RNA | 9,497 | 9,565 | 69 bp | + | – |
| ND3 | Protein-coding gene | 9,566 | 9,916 | 351 bp | + | 43.3% |
| tRNA-Arg | Transfer RNA | 9,918 | 9,987 | 70 bp | + | – |
| ND4L | Protein-coding gene | 9,989 | 10,285 | 297 bp | + | 46.8% |
| ND4 | Protein-coding gene | 10,279 | 11,656 | 1,378 bp | + | 43.1% |
| tRNA-His | Transfer RNA | 11,657 | 11,725 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,726 | 11,790 | 65 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,791 | 11,861 | 71 bp | + | – |
| ND5 | Protein-coding gene | 11,862 | 13,679 | 1,818 bp | + | 43.6% |
| CYTB | Protein-coding gene | 13,689 | 14,831 | 1,143 bp | + | 43.8% |
| tRNA-Thr | Transfer RNA | 14,835 | 14,902 | 68 bp | + | – |
| tRNA-Pro | Transfer RNA | 14,913 | 14,982 | 70 bp | − | – |
| ND6 | Protein-coding gene | 14,992 | 15,513 | 522 bp | − | 45.6% |
| tRNA-Glu | Transfer RNA | 15,515 | 15,585 | 71 bp | − | – |
| D-loop | Control region | 15,586 | 16,939 | 1,354 bp | – | 39.0% |