MitoAge

Piranga rubra

Summer tanager

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Maximum lifespan
7.9 yr
AnAge record
mtDNA size
16,805 bp
RefSeq NC_041659.1
GC content
47.00%
Whole genome
Non-coding
1,316 bp
D-loop 1,226 bp

Where Summer tanager sits among 2,335 species

Whole-genome GC content against maximum lifespan. Summer tanager has the 1,785th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Summer tanager
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Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,805 bp
GC skew (G − C) / (G + C)
−0.386
AT skew (A − T) / (A + T)
+0.132

Life history

Maximum lifespan
7.9 years
Adult weight
40 g
Birth weight
4.2 g
Female sexual maturity
365 days
Male sexual maturity
365 days
Gestation or incubation
12 days
Litter or clutch size
4
Litters per year
1.5

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 00797)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,805 bp
Protein-coding11,378 bp
12S rRNA974 bp
16S rRNA1,602 bp
All tRNA1,544 bp
D-loop1,226 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1978 bp26.2%25.8%14.0%34.0%48.06%−0.417+0.008
ND2NADH dehydrogenase subunit 21,040 bp28.7%23.2%11.5%36.6%48.17%−0.521+0.106
COX1Cytochrome c oxidase subunit I1,551 bp27.3%25.0%16.8%30.9%47.65%−0.296+0.044
COX2Cytochrome c oxidase subunit II684 bp29.1%22.5%15.9%32.5%48.39%−0.341+0.127
ATP8ATP synthase F0 subunit 8168 bp28.6%25.6%7.1%38.7%45.83%−0.688+0.055
ATP6ATP synthase F0 subunit 6684 bp29.2%23.2%10.5%37.0%47.52%−0.557+0.114
COX3Cytochrome c oxidase subunit III784 bp26.7%23.2%15.6%34.6%50.13%−0.379+0.069
ND3NADH dehydrogenase subunit 3351 bp27.4%24.5%12.5%35.6%48.15%−0.479+0.055
ND4LNADH dehydrogenase subunit 4L297 bp27.9%23.6%12.8%35.7%48.49%−0.472+0.085
ND4NADH dehydrogenase subunit 41,378 bp30.1%22.0%11.4%36.5%47.90%−0.524+0.156
ND5NADH dehydrogenase subunit 51,818 bp30.8%22.9%11.7%34.6%46.32%−0.494+0.148
ND6NADH dehydrogenase subunit 6519 bp39.3%9.1%9.4%42.2%51.64%−0.634+0.626
CYTBCytochrome b1,143 bp28.0%24.5%13.1%34.4%47.51%−0.448+0.067
12S rRNA12S ribosomal RNA974 bp30.3%19.8%21.1%28.7%49.90%−0.152+0.209
16S rRNA16S ribosomal RNA1,602 bp34.6%20.5%19.4%25.5%44.82%−0.136+0.256
D-loopControl region (D-loop)1,226 bp28.8%25.9%13.5%31.7%45.27%−0.402+0.052

Codon usage

Counts per codon, darker is more frequent

3,797 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.6%
UUU33
UUC181
Leu L17.9%
UUA56
UUG28
CUU48
CUC180
CUA320
CUG49
Ile I7.4%
AUU59
AUC221
Met M4.1%
AUA112
AUG44
Val V5.3%
GUU42
GUC62
GUA67
GUG32
Ser S7.6%
UCU30
UCC104
UCA86
UCG9
AGU10
AGC48
Pro P5.8%
CCU34
CCC93
CCA89
CCG6
Thr T8.2%
ACU49
ACC129
ACA126
ACG6
Ala A8.4%
GCU42
GCC178
GCA81
GCG17
Tyr Y2.9%
UAU20
UAC91
His H2.7%
CAU16
CAC85
Gln Q2.4%
CAA87
CAG6
Asn N3.6%
AAU23
AAC114
Lys K2.3%
AAA79
AAG7
Asp D1.8%
GAU11
GAC57
Glu E2.4%
GAA79
GAG11
Cys C0.8%
UGU7
UGC22
Trp W2.8%
UGA97
UGG9
Arg R1.9%
CGU12
CGC13
CGA47
CGG2
Gly G5.8%
GGU25
GGC65
GGA98
GGG33
Stop 0.3%
UAA5
UAG2
AGA2
AGG1

Genome map

38 annotated features in NC_041659.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (47.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
D-loopControl region11,2261,226 bp–45.3%
tRNA-PheTransfer RNA1,2271,29569 bp+–
12S rRNARibosomal RNA1,2962,269974 bp+49.9%
tRNA-ValTransfer RNA2,2702,33970 bp+–
16S rRNARibosomal RNA2,3403,9411,602 bp+44.8%
tRNA-Leu (UUR)Transfer RNA3,9424,01675 bp+–
ND1Protein-coding gene4,0335,010978 bp+48.1%
tRNA-IleTransfer RNA5,0185,09174 bp+–
tRNA-GlnTransfer RNA5,0955,16571 bp−–
tRNA-MetTransfer RNA5,1655,23369 bp+–
ND2Protein-coding gene5,2346,2731,040 bp+48.2%
tRNA-TrpTransfer RNA6,2746,34370 bp+–
tRNA-AlaTransfer RNA6,3456,41470 bp−–
tRNA-AsnTransfer RNA6,4226,49473 bp−–
tRNA-CysTransfer RNA6,4956,56167 bp−–
tRNA-TyrTransfer RNA6,5616,63171 bp−–
COX1Protein-coding gene6,6338,1831,551 bp+47.7%
tRNA-Ser (UCN)Transfer RNA8,1758,24773 bp−–
tRNA-AspTransfer RNA8,2538,32169 bp+–
COX2Protein-coding gene8,3309,013684 bp+48.4%
tRNA-LysTransfer RNA9,0159,08470 bp+–
ATP8Protein-coding gene9,0869,253168 bp+45.8%
ATP6Protein-coding gene9,2449,927684 bp+47.5%
COX3Protein-coding gene9,93310,716784 bp+50.1%
tRNA-GlyTransfer RNA10,71710,78569 bp+–
ND3Protein-coding gene10,78611,136351 bp+48.2%
tRNA-ArgTransfer RNA11,13811,20770 bp+–
ND4LProtein-coding gene11,20911,505297 bp+48.5%
ND4Protein-coding gene11,49912,8761,378 bp+47.9%
tRNA-HisTransfer RNA12,87712,94670 bp+–
tRNA-Ser (AGY)Transfer RNA12,94713,01266 bp+–
tRNA-Leu (CUN)Transfer RNA13,01213,08271 bp+–
ND5Protein-coding gene13,08314,9001,818 bp+46.3%
CYTBProtein-coding gene14,90916,0511,143 bp+47.5%
tRNA-ThrTransfer RNA16,05516,12369 bp+–
tRNA-ProTransfer RNA16,13716,20670 bp−–
ND6Protein-coding gene16,21516,733519 bp−51.6%
tRNA-GluTransfer RNA16,73516,80571 bp−–

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