Pomatostomus ruficeps
Chestnut-crowned babbler
GC content
46.69%
Whole genome
Non-coding
193 bp
Including the D-loop
Where Chestnut-crowned babbler sits among 2,335 species
Whole-genome GC content against maximum lifespan. Chestnut-crowned babbler has the 1,712th longest lifespan of them.
- This species
- Other birds
- Other classes
Base composition
Whole genome15,673 bp
- GC skew (G − C) / (G + C)
- −0.357
- AT skew (A − T) / (A + T)
- +0.088
Life history
- Maximum lifespan
- 8.3 years
- Adult weight
- 57.8 g
Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 01232)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome15,673 bp
Protein-coding11,382 bp
12S rRNA976 bp
16S rRNA1,594 bp
All tRNA1,543 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 978 bp | 46.93% | −0.364 | −0.033 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,040 bp | 46.92% | −0.496 | +0.043 | |||||
| COX1Cytochrome c oxidase subunit I | 1,554 bp | 47.10% | −0.260 | −0.010 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 47.52% | −0.342 | +0.064 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 40.48% | −0.618 | +0.020 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 46.49% | −0.497 | +0.022 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 51.85% | −0.371 | +0.032 | |||||
| ND3NADH dehydrogenase subunit 3 | 351 bp | 45.30% | −0.384 | −0.042 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 47.81% | −0.437 | −0.019 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 47.32% | −0.503 | +0.085 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,818 bp | 46.54% | −0.475 | +0.082 | |||||
| ND6NADH dehydrogenase subunit 6 | 519 bp | 51.55% | −0.466 | +0.376 | |||||
| CYTBCytochrome b | 1,143 bp | 47.77% | −0.443 | +0.059 | |||||
| 12S rRNA12S ribosomal RNA | 976 bp | 48.46% | −0.121 | +0.157 | |||||
| 16S rRNA16S ribosomal RNA | 1,594 bp | 44.04% | −0.120 | +0.235 |
Codon usage
Counts per codon, darker is more frequent3,795 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.8%
UUU49
UUC170
Leu L17.6%
UUA96
UUG17
CUU82
CUC156
CUA264
CUG54
Ile I7.6%
AUU98
AUC190
Met M3.9%
AUA105
AUG42
Val V5.1%
GUU30
GUC61
GUA72
GUG31
Ser S7.6%
UCU56
UCC93
UCA72
UCG9
AGU6
AGC54
Pro P5.9%
CCU34
CCC96
CCA87
CCG6
Thr T8.2%
ACU68
ACC123
ACA106
ACG14
Ala A8.6%
GCU67
GCC156
GCA92
GCG12
Tyr Y2.9%
UAU20
UAC91
His H2.8%
CAU24
CAC81
Gln Q2.6%
CAA83
CAG14
Asn N3.4%
AAU22
AAC108
Lys K2.2%
AAA71
AAG13
Asp D1.8%
GAU8
GAC60
Glu E2.5%
GAA73
GAG20
Cys C0.8%
UGU4
UGC26
Trp W2.7%
UGA98
UGG6
Arg R1.9%
CGU6
CGC22
CGA34
CGG9
Gly G5.9%
GGU28
GGC90
GGA67
GGG39
Stop 0.3%
UAA6
UAG0
AGA2
AGG2
Genome map
37 annotated features in NC_051464.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.7%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,044 | 976 bp | + | 48.5% |
| tRNA-Val | Transfer RNA | 1,044 | 1,112 | 69 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,113 | 2,706 | 1,594 bp | + | 44.0% |
| tRNA-Leu (UUR) | Transfer RNA | 2,707 | 2,781 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,793 | 3,770 | 978 bp | + | 46.9% |
| tRNA-Ile | Transfer RNA | 3,778 | 3,848 | 71 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,854 | 3,924 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,924 | 3,992 | 69 bp | + | – |
| ND2 | Protein-coding gene | 3,993 | 5,032 | 1,040 bp | + | 46.9% |
| tRNA-Trp | Transfer RNA | 5,033 | 5,104 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,106 | 5,174 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,183 | 5,255 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,257 | 5,323 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,324 | 5,393 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,395 | 6,948 | 1,554 bp | + | 47.1% |
| tRNA-Ser (UCN) | Transfer RNA | 6,937 | 7,011 | 75 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,016 | 7,084 | 69 bp | + | – |
| COX2 | Protein-coding gene | 7,095 | 7,778 | 684 bp | + | 47.5% |
| tRNA-Lys | Transfer RNA | 7,780 | 7,849 | 70 bp | + | – |
| ATP8 | Protein-coding gene | 7,851 | 8,018 | 168 bp | + | 40.5% |
| ATP6 | Protein-coding gene | 8,009 | 8,692 | 684 bp | + | 46.5% |
| COX3 | Protein-coding gene | 8,700 | 9,484 | 785 bp | + | 51.9% |
| tRNA-Gly | Transfer RNA | 9,484 | 9,552 | 69 bp | + | – |
| ND3 | Protein-coding gene | 9,553 | 9,903 | 351 bp | + | 45.3% |
| tRNA-Arg | Transfer RNA | 9,905 | 9,974 | 70 bp | + | – |
| ND4L | Protein-coding gene | 9,976 | 10,272 | 297 bp | + | 47.8% |
| ND4 | Protein-coding gene | 10,266 | 11,643 | 1,378 bp | + | 47.3% |
| tRNA-His | Transfer RNA | 11,644 | 11,713 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,714 | 11,778 | 65 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,778 | 11,849 | 72 bp | + | – |
| ND5 | Protein-coding gene | 11,850 | 13,667 | 1,818 bp | + | 46.5% |
| CYTB | Protein-coding gene | 13,677 | 14,819 | 1,143 bp | + | 47.8% |
| tRNA-Thr | Transfer RNA | 14,823 | 14,891 | 69 bp | + | – |
| tRNA-Pro | Transfer RNA | 14,906 | 14,975 | 70 bp | − | – |
| ND6 | Protein-coding gene | 14,985 | 15,503 | 519 bp | − | 51.6% |
| tRNA-Glu | Transfer RNA | 15,505 | 15,575 | 71 bp | − | – |