Prionace glauca

Blue shark

Maximum lifespan

20 yr

AnAge record

mtDNA size

16,705 bp

RefSeq NC_022819.1

GC content

37.47%

Whole genome

Non-coding

1,124 bp

D-loop 1,068 bp

Where Blue shark sits among 2,335 species

Whole-genome GC content against maximum lifespan. Blue shark has the 903rd longest lifespan of them.

This species
Other sharks and rays
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,705 bp

GC skew (G − C) / (G + C): −0.302
AT skew (A − T) / (A + T): +0.010

Life history

Maximum lifespan: 20 years
Adult weight: 113.2 kg
Female sexual maturity: 6 years
Litter or clutch size: 30

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01766)

About this record

Lifespan source: AnAge build 15
Based on: an animal in the wild
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: Unchanged since build 1
In the database since: build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,705 bp

Protein-coding11,407 bp

12S rRNA954 bp

16S rRNA1,671 bp

All tRNA1,549 bp

D-loop1,068 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Prionace glauca genes

ND1NADH dehydrogenase subunit 1	975 bp	29.7%	31.4%	11.4%	27.5%	38.87%	−0.414	−0.027
ND2NADH dehydrogenase subunit 2	1,045 bp	32.0%	31.2%	9.5%	27.4%	36.84%	−0.486	+0.012
COX1Cytochrome c oxidase subunit I	1,557 bp	27.5%	35.3%	15.3%	22.0%	37.25%	−0.179	−0.124
COX2Cytochrome c oxidase subunit II	691 bp	33.4%	30.5%	13.5%	22.6%	36.04%	−0.253	+0.045
ATP8ATP synthase F0 subunit 8	168 bp	38.1%	32.1%	6.0%	23.8%	29.76%	−0.600	+0.085
ATP6ATP synthase F0 subunit 6	684 bp	31.7%	33.8%	9.9%	24.6%	34.50%	−0.424	−0.031
COX3Cytochrome c oxidase subunit III	786 bp	28.1%	31.3%	15.6%	24.9%	40.59%	−0.229	−0.054
ND3NADH dehydrogenase subunit 3	349 bp	25.5%	33.0%	13.5%	28.1%	41.55%	−0.352	−0.127
ND4LNADH dehydrogenase subunit 4L	297 bp	24.2%	33.7%	12.8%	29.3%	42.09%	−0.392	−0.163
ND4NADH dehydrogenase subunit 4	1,381 bp	30.4%	32.1%	10.1%	27.4%	37.51%	−0.459	−0.027
ND5NADH dehydrogenase subunit 5	1,830 bp	31.5%	31.5%	9.7%	27.2%	36.94%	−0.473	0.000
ND6NADH dehydrogenase subunit 6	522 bp	41.2%	20.1%	8.4%	30.3%	38.70%	−0.564	+0.344
CYTBCytochrome b	1,145 bp	28.4%	33.2%	11.9%	26.6%	38.43%	−0.382	−0.078
12S rRNA12S ribosomal RNA	954 bp	33.5%	25.4%	18.6%	22.5%	41.09%	−0.097	+0.139
16S rRNA16S ribosomal RNA	1,671 bp	36.0%	27.3%	16.6%	20.1%	36.69%	−0.096	+0.138
D-loopControl region (D-loop)	1,068 bp	33.9%	36.0%	12.0%	18.2%	30.15%	−0.205	−0.029

Codon usage

Counts per codon, darker is more frequent

Gene

3,808 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.6%

UUU122

UUC128

Leu L17.2%

UUA211

UUG13

CUU143

CUC110

CUA174

CUG5

Ile I9.4%

AUU225

AUC133

Met M4.3%

AUA137

AUG28

Val V4.2%

GUU55

GUC19

GUA77

GUG9

Ser S7.0%

UCU51

UCC57

UCA98

UCG5

AGU23

AGC32

Pro P5.6%

CCU64

CCC44

CCA105

CCG1

Thr T7.6%

ACU76

ACC88

ACA124

ACG2

Ala A7.3%

GCU90

GCC89

GCA95

GCG3

Tyr Y3.2%

UAU84

UAC37

His H2.6%

CAU40

CAC59

Gln Q2.5%

CAA93

CAG2

Asn N4.0%

AAU66

AAC86

Lys K2.2%

AAA84

AAG1

Asp D1.8%

GAU44

GAC25

Glu E2.6%

GAA92

GAG6

Cys C0.6%

UGU15

UGC9

Trp W3.2%

UGA115

UGG6

Arg R1.9%

CGU19

CGC10

CGA43

CGG1

Gly G6.0%

GGU84

GGC34

GGA85

GGG24

Stop 0.2%

UAA7

UAG0

AGA0

AGG1

Genome map

38 annotated features in NC_022819.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (37.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Prionace glauca (NC_022819.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	69	69 bp	+	–
12S rRNA	Ribosomal RNA	70	1,023	954 bp	+	41.1%
tRNA-Val	Transfer RNA	1,024	1,095	72 bp	+	–
16S rRNA	Ribosomal RNA	1,096	2,766	1,671 bp	+	36.7%
tRNA-Leu (UUR)	Transfer RNA	2,767	2,841	75 bp	+	–
ND1	Protein-coding gene	2,842	3,816	975 bp	+	38.9%
tRNA-Ile	Transfer RNA	3,817	3,886	70 bp	+	–
tRNA-Gln	Transfer RNA	3,888	3,958	71 bp	−	–
tRNA-Met	Transfer RNA	3,958	4,026	69 bp	+	–
ND2	Protein-coding gene	4,027	5,071	1,045 bp	+	36.8%
tRNA-Trp	Transfer RNA	5,072	5,142	71 bp	+	–
tRNA-Ala	Transfer RNA	5,144	5,212	69 bp	−	–
tRNA-Asn	Transfer RNA	5,213	5,285	73 bp	−	–
tRNA-Cys	Transfer RNA	5,321	5,388	68 bp	−	–
tRNA-Tyr	Transfer RNA	5,390	5,458	69 bp	−	–
COX1	Protein-coding gene	5,460	7,016	1,557 bp	+	37.3%
tRNA-Ser (UCN)	Transfer RNA	7,017	7,087	71 bp	−	–
tRNA-Asp	Transfer RNA	7,091	7,160	70 bp	+	–
COX2	Protein-coding gene	7,168	7,858	691 bp	+	36.0%
tRNA-Lys	Transfer RNA	7,859	7,932	74 bp	+	–
ATP8	Protein-coding gene	7,934	8,101	168 bp	+	29.8%
ATP6	Protein-coding gene	8,092	8,775	684 bp	+	34.5%
COX3	Protein-coding gene	8,775	9,560	786 bp	+	40.6%
tRNA-Gly	Transfer RNA	9,563	9,632	70 bp	+	–
ND3	Protein-coding gene	9,633	9,981	349 bp	+	41.6%
tRNA-Arg	Transfer RNA	9,982	10,051	70 bp	+	–
ND4L	Protein-coding gene	10,052	10,348	297 bp	+	42.1%
ND4	Protein-coding gene	10,342	11,722	1,381 bp	+	37.5%
tRNA-His	Transfer RNA	11,723	11,791	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,792	11,858	67 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,859	11,930	72 bp	+	–
ND5	Protein-coding gene	11,931	13,760	1,830 bp	+	36.9%
ND6	Protein-coding gene	13,756	14,277	522 bp	−	38.7%
tRNA-Glu	Transfer RNA	14,278	14,347	70 bp	−	–
CYTB	Protein-coding gene	14,350	15,494	1,145 bp	+	38.4%
tRNA-Thr	Transfer RNA	15,495	15,566	72 bp	+	–
tRNA-Pro	Transfer RNA	15,569	15,637	69 bp	−	–
D-loop	Control region	15,638	16,705	1,068 bp	–	30.2%