MitoAge

Pseudois nayaur

Bharal

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Maximum lifespan
20.9 yr
AnAge record
mtDNA size
16,737 bp
RefSeq NC_020632.1
GC content
40.17%
Whole genome
Non-coding
1,357 bp
D-loop 1,087 bp

Where Bharal sits among 2,335 species

Whole-genome GC content against maximum lifespan. Bharal has the 857th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Bharal
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,737 bp
GC skew (G − C) / (G + C)
−0.339
AT skew (A − T) / (A + T)
+0.117

Life history

Maximum lifespan
20.9 years
Adult weight
55 kg
Female sexual maturity
2 years
Gestation or incubation
160 days
Litter or clutch size
1.5

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01985)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,737 bp
Protein-coding11,338 bp
12S rRNA958 bp
16S rRNA1,575 bp
All tRNA1,512 bp
D-loop1,087 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp31.4%27.3%11.8%29.5%41.32%−0.428+0.070
ND2NADH dehydrogenase subunit 21,042 bp37.1%26.1%8.2%28.6%36.76%−0.556+0.175
COX1Cytochrome c oxidase subunit I1,545 bp28.7%29.2%16.4%25.7%42.14%−0.220−0.009
COX2Cytochrome c oxidase subunit II684 bp34.5%26.8%14.3%24.4%38.74%−0.260+0.126
ATP8ATP synthase F0 subunit 8201 bp40.8%26.9%7.0%25.4%32.34%−0.569+0.206
ATP6ATP synthase F0 subunit 6681 bp32.6%28.0%10.6%28.8%39.35%−0.463+0.075
COX3Cytochrome c oxidase subunit III784 bp25.6%28.2%15.9%30.2%46.17%−0.309−0.047
ND3NADH dehydrogenase subunit 3346 bp30.1%28.0%11.6%30.3%41.91%−0.448+0.035
ND4LNADH dehydrogenase subunit 4L297 bp31.0%29.6%12.5%26.9%39.39%−0.368+0.022
ND4NADH dehydrogenase subunit 41,378 bp31.6%27.3%11.0%30.2%41.15%−0.467+0.073
ND5NADH dehydrogenase subunit 51,821 bp33.9%25.8%10.2%30.1%40.31%−0.496+0.137
ND6NADH dehydrogenase subunit 6528 bp41.9%21.2%7.8%29.2%36.93%−0.579+0.327
CYTBCytochrome b1,140 bp31.5%25.0%13.3%30.2%43.51%−0.387+0.115
12S rRNA12S ribosomal RNA958 bp35.9%21.3%18.4%24.4%42.80%−0.141+0.255
16S rRNA16S ribosomal RNA1,575 bp37.5%24.3%17.3%20.9%38.16%−0.095+0.214
D-loopControl region (D-loop)1,087 bp33.8%26.6%13.5%26.1%39.65%−0.318+0.119

Codon usage

Counts per codon, darker is more frequent

3,799 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.3%
UUU100
UUC141
Leu L15.6%
UUA100
UUG15
CUU68
CUC114
CUA264
CUG30
Ile I8.7%
AUU163
AUC169
Met M6.8%
AUA219
AUG41
Val V4.8%
GUU44
GUC41
GUA80
GUG17
Ser S7.3%
UCU38
UCC71
UCA105
UCG5
AGU11
AGC48
Pro P5.2%
CCU36
CCC71
CCA87
CCG2
Thr T8.6%
ACU45
ACC102
ACA165
ACG13
Ala A6.4%
GCU34
GCC96
GCA105
GCG7
Tyr Y3.4%
UAU55
UAC75
His H2.5%
CAU29
CAC67
Gln Q2.3%
CAA81
CAG7
Asn N4.3%
AAU49
AAC116
Lys K2.6%
AAA87
AAG10
Asp D1.7%
GAU19
GAC47
Glu E2.5%
GAA78
GAG18
Cys C0.6%
UGU2
UGC21
Trp W2.7%
UGA89
UGG15
Arg R1.7%
CGU6
CGC14
CGA37
CGG7
Gly G5.7%
GGU20
GGC68
GGA101
GGG26
Stop 0.2%
UAA7
UAG0
AGA1
AGG0

Genome map

38 annotated features in NC_020632.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (40.2%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA691,026958 bp+42.8%
tRNA-ValTransfer RNA1,0271,09367 bp+–
16S rRNARibosomal RNA1,0942,6681,575 bp+38.2%
tRNA-Leu (UUR)Transfer RNA2,6692,74375 bp+–
ND1Protein-coding gene2,7463,701956 bp+41.3%
tRNA-IleTransfer RNA3,7023,77069 bp+–
tRNA-GlnTransfer RNA3,7683,83972 bp−–
tRNA-MetTransfer RNA3,8423,91069 bp+–
ND2Protein-coding gene3,9114,9521,042 bp+36.8%
tRNA-TrpTransfer RNA4,9535,01967 bp+–
tRNA-AlaTransfer RNA5,0215,08969 bp−–
tRNA-AsnTransfer RNA5,0915,16373 bp−–
tRNA-CysTransfer RNA5,1965,26368 bp−–
tRNA-TyrTransfer RNA5,2645,33168 bp−–
COX1Protein-coding gene5,3336,8771,545 bp+42.1%
tRNA-Ser (UCN)Transfer RNA6,8756,94571 bp−–
tRNA-AspTransfer RNA6,9517,01868 bp+–
COX2Protein-coding gene7,0207,703684 bp+38.7%
tRNA-LysTransfer RNA7,7077,77569 bp+–
ATP8Protein-coding gene7,7777,977201 bp+32.3%
ATP6Protein-coding gene7,9388,618681 bp+39.4%
COX3Protein-coding gene8,6189,401784 bp+46.2%
tRNA-GlyTransfer RNA9,4029,47069 bp+–
ND3Protein-coding gene9,4719,816346 bp+41.9%
tRNA-ArgTransfer RNA9,8179,88670 bp+–
ND4LProtein-coding gene9,88710,183297 bp+39.4%
ND4Protein-coding gene10,17711,5541,378 bp+41.2%
tRNA-HisTransfer RNA11,55511,62369 bp+–
tRNA-Ser (AGY)Transfer RNA11,62411,68360 bp+–
tRNA-Leu (CUN)Transfer RNA11,68511,75470 bp+–
ND5Protein-coding gene11,75513,5751,821 bp+40.3%
ND6Protein-coding gene13,55914,086528 bp−36.9%
tRNA-GluTransfer RNA14,08714,15569 bp−–
CYTBProtein-coding gene14,16015,2991,140 bp+43.5%
tRNA-ThrTransfer RNA15,30315,37270 bp+–
tRNA-ProTransfer RNA15,37215,43766 bp−–
D-loopControl region15,43816,5241,087 bp–39.7%

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