Pseudorhombus cinnamoneus
Cinnamon flounder
GC content
46.72%
Whole genome
Non-coding
987 bp
D-loop 891 bp
Where Cinnamon flounder sits among 2,335 species
Whole-genome GC content against maximum lifespan. Cinnamon flounder has the 2,019th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,599 bp
- GC skew (G − C) / (G + C)
- −0.263
- AT skew (A − T) / (A + T)
- +0.014
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,599 bp
Protein-coding11,379 bp
12S rRNA956 bp
16S rRNA1,731 bp
All tRNA1,546 bp
D-loop891 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 954 bp | 48.53% | −0.330 | −0.039 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 50.19% | −0.375 | +0.002 | |||||
| COX1Cytochrome c oxidase subunit I | 1,546 bp | 48.19% | −0.216 | −0.104 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 47.03% | −0.298 | +0.011 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 49.41% | −0.614 | +0.106 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 46.93% | −0.346 | −0.058 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 49.17% | −0.280 | −0.098 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 50.72% | −0.322 | −0.221 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 49.50% | −0.374 | −0.147 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 46.34% | −0.322 | −0.042 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 46.49% | −0.364 | −0.030 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 47.70% | −0.414 | +0.385 | |||||
| CYTBCytochrome b | 1,140 bp | 47.63% | −0.344 | −0.095 | |||||
| 12S rRNA12S ribosomal RNA | 956 bp | 48.22% | −0.089 | +0.200 | |||||
| 16S rRNA16S ribosomal RNA | 1,731 bp | 44.89% | −0.084 | +0.168 | |||||
| D-loopControl region (D-loop) | 891 bp | 35.80% | −0.172 | +0.035 |
Codon usage
Counts per codon, darker is more frequent3,798 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.3%
UUU105
UUC134
Leu L17.4%
UUA72
UUG30
CUU139
CUC195
CUA163
CUG60
Ile I6.8%
AUU134
AUC124
Met M4.1%
AUA85
AUG72
Val V6.0%
GUU57
GUC60
GUA83
GUG27
Ser S7.0%
UCU43
UCC83
UCA56
UCG15
AGU17
AGC51
Pro P5.9%
CCU43
CCC112
CCA59
CCG11
Thr T7.5%
ACU49
ACC101
ACA122
ACG12
Ala A9.2%
GCU55
GCC156
GCA123
GCG16
Tyr Y2.9%
UAU45
UAC67
His H2.9%
CAU25
CAC85
Gln Q2.3%
CAA71
CAG17
Asn N3.0%
AAU47
AAC66
Lys K1.8%
AAA56
AAG12
Asp D1.9%
GAU19
GAC52
Glu E2.4%
GAA64
GAG28
Cys C0.7%
UGU8
UGC17
Trp W3.2%
UGA93
UGG30
Arg R2.1%
CGU5
CGC19
CGA39
CGG16
Gly G6.5%
GGU46
GGC88
GGA54
GGG58
Stop 0.2%
UAA5
UAG1
AGA0
AGG1
Genome map
38 annotated features in NC_022447.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.7%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,025 | 956 bp | + | 48.2% |
| tRNA-Val | Transfer RNA | 1,026 | 1,096 | 71 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,097 | 2,827 | 1,731 bp | + | 44.9% |
| tRNA-Leu (UUR) | Transfer RNA | 2,828 | 2,900 | 73 bp | + | – |
| ND1 | Protein-coding gene | 2,917 | 3,870 | 954 bp | + | 48.5% |
| tRNA-Ile | Transfer RNA | 3,877 | 3,947 | 71 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,948 | 4,018 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 4,018 | 4,086 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,087 | 5,132 | 1,046 bp | + | 50.2% |
| tRNA-Trp | Transfer RNA | 5,133 | 5,204 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,206 | 5,274 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,276 | 5,348 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,386 | 5,450 | 65 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,451 | 5,517 | 67 bp | − | – |
| COX1 | Protein-coding gene | 5,519 | 7,064 | 1,546 bp | + | 48.2% |
| tRNA-Ser (UCN) | Transfer RNA | 7,066 | 7,136 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,145 | 7,215 | 71 bp | + | – |
| COX2 | Protein-coding gene | 7,223 | 7,913 | 691 bp | + | 47.0% |
| tRNA-Lys | Transfer RNA | 7,914 | 7,986 | 73 bp | + | – |
| ATP8 | Protein-coding gene | 7,988 | 8,155 | 168 bp | + | 49.4% |
| ATP6 | Protein-coding gene | 8,146 | 8,829 | 684 bp | + | 46.9% |
| COX3 | Protein-coding gene | 8,829 | 9,613 | 785 bp | + | 49.2% |
| tRNA-Gly | Transfer RNA | 9,614 | 9,685 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,686 | 10,034 | 349 bp | + | 50.7% |
| tRNA-Arg | Transfer RNA | 10,035 | 10,103 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,104 | 10,400 | 297 bp | + | 49.5% |
| ND4 | Protein-coding gene | 10,394 | 11,774 | 1,381 bp | + | 46.3% |
| tRNA-His | Transfer RNA | 11,775 | 11,843 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,844 | 11,910 | 67 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,914 | 11,986 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,989 | 13,827 | 1,839 bp | + | 46.5% |
| ND6 | Protein-coding gene | 13,823 | 14,344 | 522 bp | − | 47.7% |
| tRNA-Glu | Transfer RNA | 14,345 | 14,412 | 68 bp | − | – |
| CYTB | Protein-coding gene | 14,424 | 15,563 | 1,140 bp | + | 47.6% |
| tRNA-Thr | Transfer RNA | 15,565 | 15,636 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,637 | 15,708 | 72 bp | − | – |
| D-loop | Control region | 15,709 | 16,599 | 891 bp | – | 35.8% |