MitoAge

Pycnonotus jocosus

Red-whiskered bulbul

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Maximum lifespan
11.1 yr
AnAge record
mtDNA size
16,928 bp
RefSeq NC_053063.1
GC content
45.56%
Whole genome
Non-coding
1,461 bp
D-loop 1,116 bp

Where Red-whiskered bulbul sits among 2,335 species

Whole-genome GC content against maximum lifespan. Red-whiskered bulbul has the 1,482nd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Red-whiskered bulbul
  • This species
  • Other birds
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,928 bp
GC skew (G − C) / (G + C)
−0.379
AT skew (A − T) / (A + T)
+0.132

Life history

Maximum lifespan
11.1 years
Adult weight
27.7 g
Birth weight
2 g
Gestation or incubation
12 days
Litter or clutch size
2.5
Litters per year
1.5

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 01243)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,928 bp
Protein-coding11,380 bp
12S rRNA958 bp
16S rRNA1,600 bp
All tRNA1,540 bp
D-loop1,116 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1978 bp27.1%25.9%14.0%33.0%47.04%−0.404+0.023
ND2NADH dehydrogenase subunit 21,040 bp31.5%24.2%10.0%34.2%44.23%−0.548+0.131
COX1Cytochrome c oxidase subunit I1,551 bp29.3%25.4%15.9%29.4%45.33%−0.297+0.071
COX2Cytochrome c oxidase subunit II685 bp30.4%22.5%15.2%32.0%47.15%−0.356+0.149
ATP8ATP synthase F0 subunit 8168 bp33.3%23.2%8.9%34.5%43.45%−0.589+0.179
ATP6ATP synthase F0 subunit 6684 bp31.3%25.3%9.9%33.5%43.42%−0.542+0.106
COX3Cytochrome c oxidase subunit III785 bp26.2%25.9%15.7%32.2%47.90%−0.346+0.007
ND3NADH dehydrogenase subunit 3351 bp29.1%26.2%13.7%31.1%44.73%−0.389+0.052
ND4LNADH dehydrogenase subunit 4L297 bp25.9%26.3%13.5%34.3%47.81%−0.437−0.006
ND4NADH dehydrogenase subunit 41,378 bp31.2%23.9%10.4%34.5%44.85%−0.537+0.132
ND5NADH dehydrogenase subunit 51,818 bp32.9%22.6%11.3%33.1%44.44%−0.490+0.186
ND6NADH dehydrogenase subunit 6519 bp40.3%11.4%9.8%38.5%48.36%−0.594+0.560
CYTBCytochrome b1,143 bp29.0%23.4%13.5%34.1%47.59%−0.434+0.105
12S rRNA12S ribosomal RNA958 bp31.1%21.3%21.3%26.3%47.60%−0.105+0.187
16S rRNA16S ribosomal RNA1,600 bp34.3%20.8%20.0%25.0%45.00%−0.111+0.245
D-loopControl region (D-loop)1,116 bp24.8%27.2%13.8%34.1%47.94%−0.424−0.046

Codon usage

Counts per codon, darker is more frequent

3,797 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.7%
UUU63
UUC153
Leu L17.3%
UUA69
UUG21
CUU69
CUC119
CUA340
CUG38
Ile I7.8%
AUU83
AUC213
Met M4.5%
AUA129
AUG43
Val V4.8%
GUU32
GUC45
GUA79
GUG28
Ser S7.4%
UCU38
UCC86
UCA95
UCG6
AGU12
AGC45
Pro P5.9%
CCU26
CCC73
CCA117
CCG8
Thr T8.6%
ACU44
ACC142
ACA138
ACG4
Ala A8.2%
GCU58
GCC146
GCA98
GCG8
Tyr Y2.9%
UAU26
UAC86
His H2.8%
CAU24
CAC82
Gln Q2.6%
CAA90
CAG7
Asn N3.5%
AAU15
AAC116
Lys K2.3%
AAA79
AAG9
Asp D1.8%
GAU16
GAC54
Glu E2.3%
GAA78
GAG8
Cys C0.8%
UGU4
UGC27
Trp W2.8%
UGA98
UGG9
Arg R1.9%
CGU2
CGC20
CGA44
CGG5
Gly G5.8%
GGU29
GGC65
GGA96
GGG31
Stop 0.2%
UAA5
UAG1
AGA1
AGG2

Genome map

38 annotated features in NC_053063.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (45.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16969 bp+–
12S rRNARibosomal RNA691,026958 bp+47.6%
tRNA-ValTransfer RNA1,0471,11670 bp+–
16S rRNARibosomal RNA1,1172,7161,600 bp+45.0%
tRNA-Leu (UUR)Transfer RNA2,7172,79175 bp+–
ND1Protein-coding gene2,8013,778978 bp+47.0%
tRNA-IleTransfer RNA3,7873,85973 bp+–
tRNA-GlnTransfer RNA3,8663,93671 bp−–
tRNA-MetTransfer RNA3,9364,00469 bp+–
ND2Protein-coding gene4,0055,0441,040 bp+44.2%
tRNA-TrpTransfer RNA5,0455,11470 bp+–
tRNA-AlaTransfer RNA5,1165,18469 bp−–
tRNA-AsnTransfer RNA5,1955,26773 bp−–
tRNA-CysTransfer RNA5,2685,33467 bp−–
tRNA-TyrTransfer RNA5,3355,40470 bp−–
COX1Protein-coding gene5,4066,9561,551 bp+45.3%
tRNA-Ser (UCN)Transfer RNA6,9487,01972 bp−–
tRNA-AspTransfer RNA7,0247,09269 bp+–
COX2Protein-coding gene7,1047,788685 bp+47.2%
tRNA-LysTransfer RNA7,7897,85870 bp+–
ATP8Protein-coding gene7,8608,027168 bp+43.5%
ATP6Protein-coding gene8,0188,701684 bp+43.4%
COX3Protein-coding gene8,7119,495785 bp+47.9%
tRNA-GlyTransfer RNA9,4959,56369 bp+–
ND3Protein-coding gene9,5649,914351 bp+44.7%
tRNA-ArgTransfer RNA9,9169,98570 bp+–
ND4LProtein-coding gene9,98710,283297 bp+47.8%
ND4Protein-coding gene10,27711,6541,378 bp+44.9%
tRNA-HisTransfer RNA11,65511,72470 bp+–
tRNA-Ser (AGY)Transfer RNA11,72511,79066 bp+–
tRNA-Leu (CUN)Transfer RNA11,79011,86071 bp+–
ND5Protein-coding gene11,86113,6781,818 bp+44.4%
CYTBProtein-coding gene13,68714,8291,143 bp+47.6%
tRNA-ThrTransfer RNA14,83314,90169 bp+–
D-loopControl region14,90216,0171,116 bp–47.9%
tRNA-ProTransfer RNA16,01816,08770 bp−–
ND6Protein-coding gene16,10216,620519 bp−48.4%
tRNA-GluTransfer RNA16,62216,69170 bp−–

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