Pyxicephalus adspersus
African bullfrog
GC content
42.31%
Whole genome
Non-coding
4,059 bp
D-loop 2,604 bp
Where African bullfrog sits among 2,335 species
Whole-genome GC content against maximum lifespan. African bullfrog has the 200th longest lifespan of them.
- This species
- Other amphibians
- Other classes
Base composition
Whole genome24,317 bp
- GC skew (G − C) / (G + C)
- −0.314
- AT skew (A − T) / (A + T)
- +0.022
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in captivity
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome24,317 bp
Protein-coding13,227 bp
12S rRNA932 bp
16S rRNA1,578 bp
All tRNA2,020 bp
D-loop2,604 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 963 bp | 41.54% | −0.430 | −0.137 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,036 bp | 42.38% | −0.490 | +0.005 | |||||
| COX1Cytochrome c oxidase subunit I | 1,554 bp | 44.14% | −0.248 | −0.058 | |||||
| COX2Cytochrome c oxidase subunit II | 688 bp | 41.57% | −0.329 | +0.040 | |||||
| ATP8ATP synthase F0 subunit 8 | 165 bp | 35.15% | −0.552 | −0.028 | |||||
| ATP6ATP synthase F0 subunit 6 | 682 bp | 42.08% | −0.533 | −0.073 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 45.48% | −0.249 | −0.093 | |||||
| ND3NADH dehydrogenase subunit 3 | 340 bp | 45.88% | −0.385 | −0.250 | |||||
| ND4LNADH dehydrogenase subunit 4L | 288 bp | 47.22% | −0.500 | −0.105 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,363 bp | 44.46% | −0.488 | −0.033 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,806 bp | 41.36% | −0.371 | −0.073 | |||||
| ND6NADH dehydrogenase subunit 6 | 486 bp | 45.06% | −0.525 | +0.363 | |||||
| CYTBCytochrome b | 1,152 bp | 46.88% | −0.385 | −0.029 | |||||
| 12S rRNA12S ribosomal RNA | 932 bp | 44.31% | −0.157 | +0.152 | |||||
| 16S rRNA16S ribosomal RNA | 1,578 bp | 40.94% | −0.127 | +0.150 | |||||
| D-loopControl region (D-loop) | 2,604 bp | 34.33% | −0.275 | −0.025 |
Codon usage
Counts per codon, darker is more frequent3,767 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F7.2%
UUU149
UUC122
Leu L16.6%
UUA107
UUG29
CUU141
CUC153
CUA147
CUG47
Ile I8.4%
AUU166
AUC152
Met M4.2%
AUA116
AUG42
Val V4.6%
GUU51
GUC50
GUA51
GUG21
Ser S7.4%
UCU67
UCC83
UCA81
UCG4
AGU13
AGC30
Pro P5.5%
CCU33
CCC72
CCA92
CCG10
Thr T8.4%
ACU86
ACC116
ACA106
ACG10
Ala A8.2%
GCU74
GCC125
GCA97
GCG13
Tyr Y2.9%
UAU51
UAC59
His H2.4%
CAU22
CAC70
Gln Q2.3%
CAA79
CAG7
Asn N3.9%
AAU56
AAC90
Lys K2.3%
AAA77
AAG11
Asp D1.9%
GAU17
GAC53
Glu E2.4%
GAA72
GAG18
Cys C0.8%
UGU11
UGC20
Trp W2.8%
UGA87
UGG18
Arg R1.9%
CGU9
CGC30
CGA31
CGG2
Gly G5.7%
GGU37
GGC79
GGA59
GGG39
Stop 0.2%
UAA3
UAG1
AGA0
AGG3
Genome map
50 annotated features in NC_044480.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding15
- rRNA4
- tRNA29
- D-loop2
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (42.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 50 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Leu | Transfer RNA | 1 | 72 | 72 bp | + | – |
| tRNA-Thr | Transfer RNA | 74 | 143 | 70 bp | + | – |
| tRNA-Pro | Transfer RNA | 144 | 212 | 69 bp | − | – |
| tRNA-Phe | Transfer RNA | 214 | 283 | 70 bp | + | – |
| 12S rRNA | Ribosomal RNA | 284 | 1,215 | 932 bp | + | 44.3% |
| tRNA-Val | Transfer RNA | 1,216 | 1,283 | 68 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,284 | 2,861 | 1,578 bp | + | 40.9% |
| tRNA-Leu | Transfer RNA | 2,862 | 2,934 | 73 bp | + | – |
| ND1 | Protein-coding gene | 2,935 | 3,897 | 963 bp | + | 41.5% |
| tRNA-Gln | Transfer RNA | 3,958 | 4,028 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 4,028 | 4,096 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,097 | 5,132 | 1,036 bp | + | 42.4% |
| tRNA-Trp | Transfer RNA | 5,133 | 5,201 | 69 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,202 | 5,271 | 70 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,272 | 5,344 | 73 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,384 | 5,450 | 67 bp | − | – |
| COX1 | Protein-coding gene | 5,452 | 7,005 | 1,554 bp | + | 44.1% |
| tRNA-Ser (UCN) | Transfer RNA | 6,997 | 7,067 | 71 bp | − | – |
| COX2 | Protein-coding gene | 7,131 | 7,818 | 688 bp | + | 41.6% |
| ATP8 | Protein-coding gene | 7,880 | 8,044 | 165 bp | + | 35.2% |
| ATP6 | Protein-coding gene | 8,035 | 8,716 | 682 bp | + | 42.1% |
| COX3 | Protein-coding gene | 8,717 | 9,501 | 785 bp | + | 45.5% |
| tRNA-Gly | Transfer RNA | 9,502 | 9,569 | 68 bp | + | – |
| ND4L | Protein-coding gene | 9,720 | 10,007 | 288 bp | + | 47.2% |
| ND4 | Protein-coding gene | 10,001 | 11,363 | 1,363 bp | + | 44.5% |
| tRNA-His | Transfer RNA | 11,364 | 11,430 | 67 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,431 | 11,497 | 67 bp | + | – |
| ND6 | Protein-coding gene | 11,641 | 12,126 | 486 bp | − | 45.1% |
| tRNA-Glu | Transfer RNA | 12,127 | 12,196 | 70 bp | + | – |
| CYTB | Protein-coding gene | 12,198 | 13,349 | 1,152 bp | + | 46.9% |
| D-loop | Control region | 13,340 | 14,646 | 1,307 bp | – | 34.3% |
| tRNA-Leu | Transfer RNA | 14,647 | 14,718 | 72 bp | + | – |
| tRNA-Thr | Transfer RNA | 14,720 | 14,789 | 70 bp | + | – |
| tRNA-Pro | Transfer RNA | 14,790 | 14,858 | 69 bp | − | – |
| tRNA-Phe | Transfer RNA | 14,860 | 14,929 | 70 bp | + | – |
| 12S rRNA | Ribosomal RNA | 14,930 | 15,861 | 932 bp | + | 44.3% |
| tRNA-Val | Transfer RNA | 15,862 | 15,929 | 68 bp | + | – |
| 16S rRNA | Ribosomal RNA | 15,930 | 17,507 | 1,578 bp | + | 40.9% |
| tRNA-Leu | Transfer RNA | 17,508 | 17,580 | 73 bp | + | – |
| tRNA-Ile | Transfer RNA | 17,603 | 17,673 | 71 bp | + | – |
| tRNA-Cys | Transfer RNA | 17,893 | 17,957 | 65 bp | − | – |
| tRNA-Asp | Transfer RNA | 17,967 | 18,035 | 69 bp | + | – |
| tRNA-Lys | Transfer RNA | 18,187 | 18,256 | 70 bp | + | – |
| COX3 | Protein-coding gene | 18,311 | 19,094 | 784 bp | + | 45.5% |
| ND3 | Protein-coding gene | 19,160 | 19,499 | 340 bp | + | 45.9% |
| tRNA-Arg | Transfer RNA | 19,500 | 19,568 | 69 bp | + | – |
| ND5 | Protein-coding gene | 19,667 | 21,472 | 1,806 bp | + | 41.4% |
| tRNA-Gln | Transfer RNA | 21,797 | 21,867 | 71 bp | − | – |
| CYTB | Protein-coding gene | 21,869 | 23,020 | 1,152 bp | + | 46.9% |
| D-loop | Control region | 23,021 | 24,317 | 1,297 bp | – | 34.3% |