MitoAge

Redunca arundinum

Southern reedbuck

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Maximum lifespan
16.8 yr
AnAge record
mtDNA size
16,439 bp
RefSeq NC_020794.1
GC content
39.09%
Whole genome
Non-coding
1,068 bp
D-loop 796 bp

Where Southern reedbuck sits among 2,335 species

Whole-genome GC content against maximum lifespan. Southern reedbuck has the 1,123rd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Southern reedbuck
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,439 bp
GC skew (G − C) / (G + C)
−0.327
AT skew (A − T) / (A + T)
+0.106

Life history

Maximum lifespan
16.8 years
Adult weight
58 kg
Birth weight
4.5 kg
Gestation or incubation
224 days
Litter or clutch size
1

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01988)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,439 bp
Protein-coding11,338 bp
12S rRNA956 bp
16S rRNA1,570 bp
All tRNA1,510 bp
D-loop796 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp31.8%27.2%12.0%29.0%41.00%−0.413+0.078
ND2NADH dehydrogenase subunit 21,042 bp36.4%26.3%9.1%28.2%37.33%−0.512+0.161
COX1Cytochrome c oxidase subunit I1,545 bp29.2%29.3%16.4%25.2%41.55%−0.212−0.001
COX2Cytochrome c oxidase subunit II684 bp35.4%26.2%13.6%24.9%38.45%−0.293+0.150
ATP8ATP synthase F0 subunit 8201 bp39.8%25.9%6.5%27.9%34.33%−0.623+0.212
ATP6ATP synthase F0 subunit 6681 bp32.6%28.3%11.6%27.5%39.06%−0.406+0.070
COX3Cytochrome c oxidase subunit III784 bp27.6%30.5%14.0%27.9%41.96%−0.331−0.051
ND3NADH dehydrogenase subunit 3346 bp29.8%28.9%11.8%29.5%41.33%−0.427+0.015
ND4LNADH dehydrogenase subunit 4L297 bp32.3%30.3%11.4%25.9%37.37%−0.387+0.032
ND4NADH dehydrogenase subunit 41,378 bp32.4%28.8%10.4%28.4%38.75%−0.464+0.059
ND5NADH dehydrogenase subunit 51,821 bp33.7%28.4%10.0%27.8%37.84%−0.469+0.085
ND6NADH dehydrogenase subunit 6528 bp41.9%22.5%7.4%28.2%35.61%−0.585+0.300
CYTBCytochrome b1,140 bp31.8%27.5%12.7%28.1%40.79%−0.376+0.073
12S rRNA12S ribosomal RNA956 bp37.2%21.5%17.7%23.5%41.21%−0.142+0.267
16S rRNA16S ribosomal RNA1,570 bp37.6%23.9%17.3%21.1%38.41%−0.098+0.222
D-loopControl region (D-loop)796 bp30.4%28.4%16.6%24.6%41.21%−0.195+0.034

Codon usage

Counts per codon, darker is more frequent

3,799 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.3%
UUU114
UUC124
Leu L15.9%
UUA97
UUG10
CUU62
CUC102
CUA304
CUG29
Ile I8.8%
AUU172
AUC163
Met M6.8%
AUA220
AUG40
Val V4.8%
GUU42
GUC43
GUA87
GUG12
Ser S7.3%
UCU50
UCC66
UCA100
UCG3
AGU10
AGC49
Pro P5.1%
CCU38
CCC68
CCA82
CCG5
Thr T8.2%
ACU56
ACC74
ACA172
ACG10
Ala A6.4%
GCU46
GCC84
GCA113
GCG1
Tyr Y3.6%
UAU75
UAC61
His H2.5%
CAU28
CAC66
Gln Q2.3%
CAA81
CAG7
Asn N4.2%
AAU60
AAC101
Lys K2.6%
AAA89
AAG8
Asp D1.7%
GAU24
GAC42
Glu E2.5%
GAA79
GAG17
Cys C0.6%
UGU12
UGC10
Trp W2.8%
UGA96
UGG9
Arg R1.7%
CGU5
CGC14
CGA43
CGG2
Gly G5.6%
GGU34
GGC56
GGA94
GGG30
Stop 0.2%
UAA6
UAG1
AGA1
AGG0

Genome map

38 annotated features in NC_020794.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.1%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA691,024956 bp+41.2%
tRNA-ValTransfer RNA1,0251,09167 bp+–
16S rRNARibosomal RNA1,0922,6611,570 bp+38.4%
tRNA-Leu (UUR)Transfer RNA2,6622,73675 bp+–
ND1Protein-coding gene2,7393,694956 bp+41.0%
tRNA-IleTransfer RNA3,6953,76470 bp+–
tRNA-GlnTransfer RNA3,7623,83372 bp−–
tRNA-MetTransfer RNA3,8363,90469 bp+–
ND2Protein-coding gene3,9054,9461,042 bp+37.3%
tRNA-TrpTransfer RNA4,9475,01367 bp+–
tRNA-AlaTransfer RNA5,0155,08369 bp−–
tRNA-AsnTransfer RNA5,0855,15773 bp−–
tRNA-CysTransfer RNA5,1905,25667 bp−–
tRNA-TyrTransfer RNA5,2575,32468 bp−–
COX1Protein-coding gene5,3266,8701,545 bp+41.6%
tRNA-Ser (UCN)Transfer RNA6,8686,93871 bp−–
tRNA-AspTransfer RNA6,9447,01168 bp+–
COX2Protein-coding gene7,0137,696684 bp+38.5%
tRNA-LysTransfer RNA7,7007,76768 bp+–
ATP8Protein-coding gene7,7697,969201 bp+34.3%
ATP6Protein-coding gene7,9308,610681 bp+39.1%
COX3Protein-coding gene8,6109,393784 bp+42.0%
tRNA-GlyTransfer RNA9,3949,46269 bp+–
ND3Protein-coding gene9,4639,808346 bp+41.3%
tRNA-ArgTransfer RNA9,8099,87870 bp+–
ND4LProtein-coding gene9,87910,175297 bp+37.4%
ND4Protein-coding gene10,16911,5461,378 bp+38.8%
tRNA-HisTransfer RNA11,54711,61569 bp+–
tRNA-Ser (AGY)Transfer RNA11,61611,67459 bp+–
tRNA-Leu (CUN)Transfer RNA11,67611,74570 bp+–
ND5Protein-coding gene11,74613,5661,821 bp+37.8%
ND6Protein-coding gene13,55014,077528 bp−35.6%
tRNA-GluTransfer RNA14,07814,14669 bp−–
CYTBProtein-coding gene14,15115,2901,140 bp+40.8%
tRNA-ThrTransfer RNA15,29415,36370 bp+–
tRNA-ProTransfer RNA15,36315,42866 bp−–
D-loopControl region15,44016,235796 bp–41.2%

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