MitoAge

Sus barbatus

Bearded pig

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Maximum lifespan
16.2 yr
AnAge record
mtDNA size
16,480 bp
RefSeq NC_026992.1
GC content
39.19%
Whole genome
Non-coding
1,115 bp
Including the D-loop

Where Bearded pig sits among 2,335 species

Whole-genome GC content against maximum lifespan. Bearded pig has the 1,141st longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Bearded pig
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,480 bp
GC skew (G − C) / (G + C)
−0.330
AT skew (A − T) / (A + T)
+0.144

Life history

Maximum lifespan
16.2 years
Adult weight
102.8 kg
Female sexual maturity
362 days
Gestation or incubation
122 days
Litter or clutch size
4
Litters per year
1

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02058)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,480 bp
Protein-coding11,340 bp
12S rRNA959 bp
16S rRNA1,572 bp
All tRNA1,507 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1951 bp32.7%24.8%12.5%30.0%42.48%−0.411+0.137
ND2NADH dehydrogenase subunit 21,044 bp39.6%23.9%9.2%27.4%36.59%−0.497+0.248
COX1Cytochrome c oxidase subunit I1,545 bp29.3%29.4%16.7%24.7%41.36%−0.192−0.002
COX2Cytochrome c oxidase subunit II688 bp34.3%27.6%13.5%24.6%38.08%−0.290+0.108
ATP8ATP synthase F0 subunit 8204 bp40.2%27.5%7.8%24.5%32.35%−0.515+0.188
ATP6ATP synthase F0 subunit 6681 bp33.8%26.6%10.6%29.1%39.65%−0.467+0.119
COX3Cytochrome c oxidase subunit III785 bp29.8%27.6%14.6%27.9%42.55%−0.311+0.038
ND3NADH dehydrogenase subunit 3347 bp34.6%25.6%11.0%28.8%39.77%−0.449+0.148
ND4LNADH dehydrogenase subunit 4L297 bp32.7%31.0%11.4%24.9%36.36%−0.370+0.026
ND4NADH dehydrogenase subunit 41,383 bp34.3%26.4%10.1%29.3%39.34%−0.489+0.130
ND5NADH dehydrogenase subunit 51,804 bp34.8%26.4%10.6%28.2%38.86%−0.452+0.137
ND6NADH dehydrogenase subunit 6522 bp44.8%20.5%7.7%27.0%34.67%−0.558+0.372
CYTBCytochrome b1,140 bp31.5%26.1%13.1%29.4%42.46%−0.384+0.095
12S rRNA12S ribosomal RNA959 bp37.1%22.6%17.2%23.0%40.25%−0.145+0.243
16S rRNA16S ribosomal RNA1,572 bp39.0%23.8%16.5%20.7%37.21%−0.115+0.242

Codon usage

Counts per codon, darker is more frequent

3,795 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%
UUU89
UUC138
Leu L15.3%
UUA93
UUG15
CUU53
CUC69
CUA314
CUG36
Ile I8.9%
AUU166
AUC170
Met M6.9%
AUA224
AUG39
Val V4.7%
GUU31
GUC19
GUA113
GUG16
Ser S7.5%
UCU37
UCC71
UCA118
UCG3
AGU9
AGC48
Pro P5.0%
CCU26
CCC68
CCA92
CCG4
Thr T8.2%
ACU54
ACC79
ACA172
ACG5
Ala A6.8%
GCU42
GCC95
GCA121
GCG1
Tyr Y3.7%
UAU59
UAC80
His H2.7%
CAU24
CAC77
Gln Q2.3%
CAA83
CAG5
Asn N4.1%
AAU45
AAC109
Lys K2.6%
AAA94
AAG5
Asp D1.7%
GAU21
GAC45
Glu E2.6%
GAA82
GAG17
Cys C0.7%
UGU9
UGC17
Trp W2.7%
UGA100
UGG4
Arg R1.7%
CGU6
CGC11
CGA47
CGG1
Gly G5.7%
GGU36
GGC51
GGA106
GGG22
Stop 0.2%
UAA5
UAG2
AGA2
AGG0

Genome map

37 annotated features in NC_026992.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.2%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA1,0461,11570 bp+–
12S rRNARibosomal RNA1,1162,074959 bp+40.3%
tRNA-ValTransfer RNA2,0742,14168 bp+–
16S rRNARibosomal RNA2,1403,7111,572 bp+37.2%
tRNA-Leu (UUR)Transfer RNA3,7123,78675 bp+–
ND1Protein-coding gene3,7954,745951 bp+42.5%
tRNA-IleTransfer RNA4,7444,81269 bp+–
tRNA-GlnTransfer RNA4,8104,88273 bp−–
tRNA-MetTransfer RNA4,8844,95370 bp+–
ND2Protein-coding gene4,9545,9971,044 bp+36.6%
tRNA-TrpTransfer RNA5,9966,06368 bp+–
tRNA-AlaTransfer RNA6,0706,13768 bp−–
tRNA-AsnTransfer RNA6,1396,21375 bp−–
tRNA-CysTransfer RNA6,2466,31166 bp−–
tRNA-TyrTransfer RNA6,3126,37766 bp−–
COX1Protein-coding gene6,3797,9231,545 bp+41.4%
tRNA-Ser (UCN)Transfer RNA7,9277,99569 bp−–
tRNA-AspTransfer RNA8,0038,07068 bp+–
COX2Protein-coding gene8,0718,758688 bp+38.1%
tRNA-LysTransfer RNA8,7598,82567 bp+–
ATP8Protein-coding gene8,8279,030204 bp+32.4%
ATP6Protein-coding gene8,9889,668681 bp+39.7%
COX3Protein-coding gene9,66810,452785 bp+42.6%
tRNA-GlyTransfer RNA10,45210,52069 bp+–
ND3Protein-coding gene10,52110,867347 bp+39.8%
tRNA-ArgTransfer RNA10,86810,93669 bp+–
ND4LProtein-coding gene10,93711,233297 bp+36.4%
ND4Protein-coding gene11,22712,6091,383 bp+39.3%
tRNA-HisTransfer RNA12,60512,67369 bp+–
tRNA-Ser (AGY)Transfer RNA12,67412,73259 bp+–
tRNA-Leu (CUN)Transfer RNA12,73312,80270 bp+–
ND5Protein-coding gene12,80314,6061,804 bp+38.9%
ND6Protein-coding gene14,60715,128522 bp−34.7%
tRNA-GluTransfer RNA15,13515,20369 bp−–
CYTBProtein-coding gene15,20816,3471,140 bp+42.5%
tRNA-ThrTransfer RNA16,34816,41669 bp+–
tRNA-ProTransfer RNA16,41616,48065 bp−–

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