Sylvia borin
Garden warbler
GC content
45.16%
Whole genome
Non-coding
2,483 bp
D-loop 1,282 bp
Where Garden warbler sits among 2,335 species
Whole-genome GC content against maximum lifespan. Garden warbler has the 696th longest lifespan of them.
- This species
- Other birds
- Other classes
Base composition
Whole genome17,971 bp
- GC skew (G − C) / (G + C)
- −0.371
- AT skew (A − T) / (A + T)
- +0.101
Life history
- Maximum lifespan
- 24 years
- Adult weight
- 24.6 g
- Basal metabolic rate
- 0.416 W
- Female sexual maturity
- 365 days
- Male sexual maturity
- 365 days
- Postnatal growth rate
- 0.208 per day
Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 01267)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in captivity
- Data quality
- acceptable, small sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome17,971 bp
Protein-coding11,377 bp
12S rRNA980 bp
16S rRNA1,598 bp
All tRNA1,545 bp
D-loop1,282 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 978 bp | 46.32% | −0.439 | +0.036 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,040 bp | 43.56% | −0.541 | +0.148 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 47.26% | −0.310 | +0.066 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 45.76% | −0.367 | +0.143 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 39.29% | −0.758 | +0.098 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 44.88% | −0.524 | +0.093 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 47.01% | −0.350 | +0.010 | |||||
| ND3NADH dehydrogenase subunit 3 | 350 bp | 48.86% | −0.357 | −0.006 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 49.83% | −0.473 | +0.060 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 44.05% | −0.509 | +0.144 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,818 bp | 43.23% | −0.483 | +0.149 | |||||
| ND6NADH dehydrogenase subunit 6 | 519 bp | 46.63% | −0.587 | +0.509 | |||||
| CYTBCytochrome b | 1,142 bp | 46.76% | −0.427 | +0.063 | |||||
| 12S rRNA12S ribosomal RNA | 980 bp | 48.21% | −0.093 | +0.176 | |||||
| 16S rRNA16S ribosomal RNA | 1,598 bp | 43.74% | −0.090 | +0.224 | |||||
| D-loopControl region (D-loop) | 1,282 bp | 45.09% | −0.443 | −0.082 |
Codon usage
Counts per codon, darker is more frequent3,795 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.7%
UUU54
UUC162
Leu L17.5%
UUA73
UUG26
CUU57
CUC140
CUA319
CUG48
Ile I7.7%
AUU81
AUC213
Met M4.5%
AUA141
AUG30
Val V4.8%
GUU36
GUC40
GUA88
GUG20
Ser S7.2%
UCU38
UCC90
UCA88
UCG6
AGU7
AGC43
Pro P5.9%
CCU40
CCC67
CCA114
CCG3
Thr T9.0%
ACU59
ACC137
ACA135
ACG9
Ala A8.1%
GCU62
GCC132
GCA107
GCG8
Tyr Y3.0%
UAU31
UAC82
His H2.6%
CAU22
CAC77
Gln Q2.5%
CAA85
CAG9
Asn N3.7%
AAU18
AAC121
Lys K2.3%
AAA80
AAG7
Asp D1.8%
GAU12
GAC55
Glu E2.3%
GAA74
GAG13
Cys C0.8%
UGU7
UGC22
Trp W2.8%
UGA96
UGG10
Arg R1.9%
CGU7
CGC21
CGA40
CGG4
Gly G5.8%
GGU36
GGC57
GGA97
GGG31
Stop 0.2%
UAA4
UAG1
AGA2
AGG1
Genome map
38 annotated features in NC_053054.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (45.2%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 70 | 70 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,049 | 980 bp | + | 48.2% |
| tRNA-Val | Transfer RNA | 1,049 | 1,118 | 70 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,121 | 2,718 | 1,598 bp | + | 43.7% |
| tRNA-Leu (UUR) | Transfer RNA | 2,720 | 2,794 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,812 | 3,789 | 978 bp | + | 46.3% |
| tRNA-Ile | Transfer RNA | 3,797 | 3,869 | 73 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,876 | 3,946 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,946 | 4,014 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,015 | 5,054 | 1,040 bp | + | 43.6% |
| tRNA-Trp | Transfer RNA | 5,055 | 5,124 | 70 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,126 | 5,194 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,205 | 5,277 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,278 | 5,344 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,345 | 5,414 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,416 | 6,966 | 1,551 bp | + | 47.3% |
| tRNA-Ser (UCN) | Transfer RNA | 6,958 | 7,030 | 73 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,036 | 7,104 | 69 bp | + | – |
| COX2 | Protein-coding gene | 7,110 | 7,793 | 684 bp | + | 45.8% |
| tRNA-Lys | Transfer RNA | 7,795 | 7,864 | 70 bp | + | – |
| ATP8 | Protein-coding gene | 7,866 | 8,033 | 168 bp | + | 39.3% |
| ATP6 | Protein-coding gene | 8,024 | 8,707 | 684 bp | + | 44.9% |
| COX3 | Protein-coding gene | 8,719 | 9,503 | 785 bp | + | 47.0% |
| tRNA-Gly | Transfer RNA | 9,503 | 9,571 | 69 bp | + | – |
| ND3 | Protein-coding gene | 9,572 | 9,921 | 350 bp | + | 48.9% |
| tRNA-Arg | Transfer RNA | 9,922 | 9,992 | 71 bp | + | – |
| ND4L | Protein-coding gene | 9,994 | 10,290 | 297 bp | + | 49.8% |
| ND4 | Protein-coding gene | 10,284 | 11,661 | 1,378 bp | + | 44.1% |
| tRNA-His | Transfer RNA | 11,662 | 11,731 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,732 | 11,797 | 66 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,798 | 11,868 | 71 bp | + | – |
| ND5 | Protein-coding gene | 11,869 | 13,686 | 1,818 bp | + | 43.2% |
| CYTB | Protein-coding gene | 13,696 | 14,837 | 1,142 bp | + | 46.8% |
| tRNA-Thr | Transfer RNA | 14,838 | 14,907 | 70 bp | + | – |
| tRNA-Pro | Transfer RNA | 16,024 | 16,093 | 70 bp | − | – |
| ND6 | Protein-coding gene | 16,101 | 16,619 | 519 bp | − | 46.6% |
| tRNA-Glu | Transfer RNA | 16,620 | 16,689 | 70 bp | − | – |
| D-loop | Control region | 16,690 | 17,971 | 1,282 bp | – | 45.1% |