MitoAge

Thryothorus ludovicianus

Carolina wren

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Maximum lifespan
9.2 yr
AnAge record
mtDNA size
16,794 bp
RefSeq NC_051032.1
GC content
48.48%
Whole genome
Non-coding
1,316 bp
D-loop 1,212 bp

Where Carolina wren sits among 2,335 species

Whole-genome GC content against maximum lifespan. Carolina wren has the 1,642nd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Carolina wren
  • This species
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Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,794 bp
GC skew (G − C) / (G + C)
−0.367
AT skew (A − T) / (A + T)
+0.118

Life history

Maximum lifespan
9.2 years
Adult weight
17.5 g
Birth weight
2.4 g
Female sexual maturity
365 days
Male sexual maturity
365 days
Gestation or incubation
14 days
Litter or clutch size
4
Litters per year
1

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 01287)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,794 bp
Protein-coding11,378 bp
12S rRNA984 bp
16S rRNA1,591 bp
All tRNA1,536 bp
D-loop1,212 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1978 bp25.7%24.4%15.5%34.4%49.90%−0.377+0.024
ND2NADH dehydrogenase subunit 21,040 bp28.9%22.1%11.2%37.8%48.94%−0.544+0.134
COX1Cytochrome c oxidase subunit I1,551 bp26.5%23.8%17.3%32.3%49.68%−0.301+0.054
COX2Cytochrome c oxidase subunit II684 bp28.1%21.2%16.4%34.4%50.73%−0.354+0.139
ATP8ATP synthase F0 subunit 8168 bp31.5%22.6%6.5%39.3%45.83%−0.714+0.165
ATP6ATP synthase F0 subunit 6684 bp27.0%22.5%12.4%38.0%50.44%−0.507+0.091
COX3Cytochrome c oxidase subunit III784 bp24.2%22.6%16.8%36.4%53.19%−0.367+0.035
ND3NADH dehydrogenase subunit 3351 bp27.4%25.1%12.8%34.8%47.58%−0.461+0.043
ND4LNADH dehydrogenase subunit 4L297 bp25.6%23.9%13.1%37.4%50.51%−0.480+0.034
ND4NADH dehydrogenase subunit 41,378 bp29.2%21.9%11.5%37.3%48.84%−0.527+0.143
ND5NADH dehydrogenase subunit 51,818 bp29.0%22.3%12.8%35.9%48.68%−0.476+0.130
ND6NADH dehydrogenase subunit 6519 bp36.8%12.9%10.8%39.3%50.19%−0.569+0.481
CYTBCytochrome b1,143 bp26.9%23.2%14.3%35.6%49.96%−0.426+0.073
12S rRNA12S ribosomal RNA984 bp29.9%21.2%22.3%26.6%48.88%−0.089+0.169
16S rRNA16S ribosomal RNA1,591 bp32.7%20.9%20.6%25.8%46.39%−0.114+0.219
D-loopControl region (D-loop)1,212 bp27.1%27.0%15.7%30.3%45.96%−0.318+0.002

Codon usage

Counts per codon, darker is more frequent

3,795 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.7%
UUU51
UUC166
Leu L17.5%
UUA61
UUG6
CUU44
CUC181
CUA288
CUG86
Ile I7.5%
AUU49
AUC235
Met M4.1%
AUA102
AUG54
Val V5.1%
GUU26
GUC83
GUA58
GUG27
Ser S7.5%
UCU27
UCC110
UCA81
UCG10
AGU5
AGC50
Pro P5.8%
CCU28
CCC96
CCA89
CCG9
Thr T8.6%
ACU33
ACC170
ACA112
ACG10
Ala A8.4%
GCU28
GCC187
GCA88
GCG15
Tyr Y3.0%
UAU18
UAC95
His H2.8%
CAU17
CAC88
Gln Q2.5%
CAA78
CAG18
Asn N3.4%
AAU15
AAC114
Lys K2.2%
AAA77
AAG6
Asp D1.8%
GAU16
GAC53
Glu E2.3%
GAA71
GAG17
Cys C0.8%
UGU3
UGC26
Trp W2.8%
UGA100
UGG8
Arg R1.9%
CGU7
CGC15
CGA40
CGG10
Gly G6.0%
GGU19
GGC82
GGA80
GGG47
Stop 0.3%
UAA6
UAG1
AGA1
AGG2

Genome map

38 annotated features in NC_051032.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (48.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA681,051984 bp+48.9%
tRNA-ValTransfer RNA1,0511,12070 bp+–
16S rRNARibosomal RNA1,1212,7111,591 bp+46.4%
tRNA-Leu (UUR)Transfer RNA2,7122,78675 bp+–
ND1Protein-coding gene2,8153,792978 bp+49.9%
tRNA-IleTransfer RNA3,8073,87973 bp+–
tRNA-GlnTransfer RNA3,8853,95571 bp−–
tRNA-MetTransfer RNA3,9554,02369 bp+–
ND2Protein-coding gene4,0245,0631,040 bp+48.9%
tRNA-TrpTransfer RNA5,0645,13370 bp+–
tRNA-AlaTransfer RNA5,1355,20369 bp−–
tRNA-AsnTransfer RNA5,2135,28573 bp−–
tRNA-CysTransfer RNA5,2865,35267 bp−–
tRNA-TyrTransfer RNA5,3535,42270 bp−–
COX1Protein-coding gene5,4246,9741,551 bp+49.7%
tRNA-Ser (UCN)Transfer RNA6,9667,03873 bp−–
tRNA-AspTransfer RNA7,0427,11069 bp+–
COX2Protein-coding gene7,1187,801684 bp+50.7%
tRNA-LysTransfer RNA7,8037,86967 bp+–
ATP8Protein-coding gene7,8718,038168 bp+45.8%
ATP6Protein-coding gene8,0298,712684 bp+50.4%
COX3Protein-coding gene8,7209,503784 bp+53.2%
tRNA-GlyTransfer RNA9,5049,57269 bp+–
ND3Protein-coding gene9,5739,923351 bp+47.6%
tRNA-ArgTransfer RNA9,9259,99369 bp+–
ND4LProtein-coding gene9,99510,291297 bp+50.5%
ND4Protein-coding gene10,28511,6621,378 bp+48.8%
tRNA-HisTransfer RNA11,66311,73270 bp+–
tRNA-Ser (AGY)Transfer RNA11,73311,79866 bp+–
tRNA-Leu (CUN)Transfer RNA11,79811,86871 bp+–
ND5Protein-coding gene11,86913,6861,818 bp+48.7%
CYTBProtein-coding gene13,69814,8401,143 bp+50.0%
tRNA-ThrTransfer RNA14,84414,91269 bp+–
tRNA-ProTransfer RNA14,91814,98669 bp−–
ND6Protein-coding gene14,99315,511519 bp−50.2%
tRNA-GluTransfer RNA15,51215,58271 bp−–
D-loopControl region15,58316,7941,212 bp–46.0%

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