MitoAge

Tragulus napu

Greater mouse-deer

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Maximum lifespan
16.7 yr
AnAge record
mtDNA size
15,779 bp
RefSeq NC_035821.1
GC content
41.87%
Whole genome
Non-coding
410 bp
D-loop 2 bp

Where Greater mouse-deer sits among 2,335 species

Whole-genome GC content against maximum lifespan. Greater mouse-deer has the 1,127th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Greater mouse-deer
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome15,779 bp
GC skew (G − C) / (G + C)
−0.322
AT skew (A − T) / (A + T)
+0.110

Life history

Maximum lifespan
16.7 years
Adult weight
6.5 kg
Birth weight
373 g
Female sexual maturity
137 days
Male sexual maturity
135 days
Gestation or incubation
153 days
Litter or clutch size
1
Litters per year
1

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 02068)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome15,779 bp
Protein-coding11,339 bp
12S rRNA960 bp
16S rRNA1,575 bp
All tRNA1,498 bp
D-loop2 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp30.0%26.8%14.0%29.2%43.20%−0.351+0.057
ND2NADH dehydrogenase subunit 21,042 bp35.9%25.7%9.2%29.2%38.39%−0.520+0.165
COX1Cytochrome c oxidase subunit I1,545 bp26.0%28.3%18.0%27.8%45.76%−0.214−0.043
COX2Cytochrome c oxidase subunit II684 bp30.1%27.0%14.9%27.9%42.84%−0.304+0.054
ATP8ATP synthase F0 subunit 8207 bp37.2%23.7%6.8%32.4%39.13%−0.654+0.222
ATP6ATP synthase F0 subunit 6681 bp29.5%26.6%12.9%31.0%43.91%−0.411+0.052
COX3Cytochrome c oxidase subunit III784 bp26.9%27.4%15.7%30.0%45.66%−0.313−0.009
ND3NADH dehydrogenase subunit 3347 bp30.8%29.1%13.3%26.8%40.06%−0.338+0.029
ND4LNADH dehydrogenase subunit 4L297 bp30.6%29.0%12.8%27.6%40.40%−0.367+0.028
ND4NADH dehydrogenase subunit 41,378 bp31.2%25.8%11.1%31.9%43.03%−0.484+0.096
ND5NADH dehydrogenase subunit 51,821 bp32.3%25.8%11.4%30.5%41.90%−0.455+0.112
ND6NADH dehydrogenase subunit 6528 bp41.1%21.0%8.5%29.4%37.88%−0.550+0.323
CYTBCytochrome b1,140 bp29.6%26.8%14.6%29.0%43.60%−0.332+0.051
12S rRNA12S ribosomal RNA960 bp35.7%20.7%19.9%23.6%43.54%−0.086+0.266
16S rRNA16S ribosomal RNA1,575 bp36.4%23.6%18.3%21.7%40.00%−0.086+0.213
D-loopControl region (D-loop)2 bp100.0%0.0%0.0%0.0%0.00%–+1.000

Codon usage

Counts per codon, darker is more frequent

3,801 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.2%
UUU107
UUC128
Leu L15.7%
UUA64
UUG17
CUU75
CUC103
CUA274
CUG64
Ile I8.5%
AUU125
AUC197
Met M6.5%
AUA182
AUG66
Val V5.1%
GUU32
GUC55
GUA76
GUG30
Ser S7.5%
UCU52
UCC70
UCA100
UCG7
AGU13
AGC43
Pro P5.2%
CCU45
CCC71
CCA78
CCG4
Thr T8.4%
ACU46
ACC110
ACA154
ACG9
Ala A6.6%
GCU37
GCC104
GCA99
GCG9
Tyr Y3.3%
UAU47
UAC78
His H2.7%
CAU23
CAC79
Gln Q2.3%
CAA75
CAG13
Asn N4.3%
AAU50
AAC112
Lys K2.6%
AAA85
AAG12
Asp D1.7%
GAU18
GAC48
Glu E2.6%
GAA65
GAG32
Cys C0.7%
UGU7
UGC18
Trp W2.7%
UGA90
UGG14
Arg R1.7%
CGU6
CGC18
CGA40
CGG1
Gly G5.7%
GGU36
GGC64
GGA82
GGG34
Stop 0.2%
UAA6
UAG1
AGA1
AGG0

Genome map

38 annotated features in NC_035821.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (41.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA23130070 bp+–
12S rRNARibosomal RNA3011,260960 bp+43.5%
tRNA-ValTransfer RNA1,2611,32767 bp+–
16S rRNARibosomal RNA1,3282,9021,575 bp+40.0%
tRNA-Leu (UUR)Transfer RNA2,9032,97674 bp+–
ND1Protein-coding gene2,9803,935956 bp+43.2%
tRNA-IleTransfer RNA3,9364,00469 bp+–
tRNA-GlnTransfer RNA4,0024,07473 bp−–
tRNA-MetTransfer RNA4,0774,14670 bp+–
ND2Protein-coding gene4,1475,1881,042 bp+38.4%
tRNA-TrpTransfer RNA5,1895,25466 bp+–
tRNA-AlaTransfer RNA5,2565,32267 bp−–
tRNA-AsnTransfer RNA5,3255,39773 bp−–
tRNA-CysTransfer RNA5,4305,49667 bp−–
tRNA-TyrTransfer RNA5,4985,55861 bp−–
COX1Protein-coding gene5,5667,1101,545 bp+45.8%
tRNA-Ser (UCN)Transfer RNA7,1087,17669 bp−–
tRNA-AspTransfer RNA7,1807,24869 bp+–
COX2Protein-coding gene7,2497,932684 bp+42.8%
tRNA-LysTransfer RNA7,9368,00166 bp+–
ATP8Protein-coding gene8,0048,210207 bp+39.1%
ATP6Protein-coding gene8,1658,845681 bp+43.9%
COX3Protein-coding gene8,8459,628784 bp+45.7%
tRNA-GlyTransfer RNA9,6299,69769 bp+–
ND3Protein-coding gene9,69810,044347 bp+40.1%
tRNA-ArgTransfer RNA10,04510,11268 bp+–
ND4LProtein-coding gene10,11310,409297 bp+40.4%
ND4Protein-coding gene10,40311,7801,378 bp+43.0%
tRNA-HisTransfer RNA11,78111,84969 bp+–
tRNA-Ser (AGY)Transfer RNA11,85111,90858 bp+–
tRNA-Leu (CUN)Transfer RNA11,91011,97970 bp+–
ND5Protein-coding gene11,98013,8001,821 bp+41.9%
ND6Protein-coding gene13,78414,311528 bp−37.9%
tRNA-GluTransfer RNA14,31214,38069 bp−–
CYTBProtein-coding gene14,38515,5241,140 bp+43.6%
tRNA-ThrTransfer RNA15,52515,59470 bp+–
tRNA-ProTransfer RNA15,59515,66167 bp−–
D-loopControl region15,66215,6632 bp–0.0%

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