MitoAge

Tregellasia capito

Pale-yellow robin

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Maximum lifespan
13.2 yr
AnAge record
mtDNA size
16,764 bp
RefSeq NC_027231.1
GC content
46.37%
Whole genome
Non-coding
1,283 bp
D-loop 1,169 bp

Where Pale-yellow robin sits among 2,335 species

Whole-genome GC content against maximum lifespan. Pale-yellow robin has the 1,339th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Pale-yellow robin
  • This species
  • Other birds
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Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,764 bp
GC skew (G − C) / (G + C)
−0.368
AT skew (A − T) / (A + T)
+0.126

Life history

Maximum lifespan
13.2 years
Adult weight
13.9 g

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 01217)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,764 bp
Protein-coding11,381 bp
12S rRNA970 bp
16S rRNA1,598 bp
All tRNA1,542 bp
D-loop1,169 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1978 bp27.5%26.7%14.3%31.5%45.81%−0.375+0.015
ND2NADH dehydrogenase subunit 21,041 bp30.9%24.3%11.2%33.5%44.77%−0.498+0.120
COX1Cytochrome c oxidase subunit I1,551 bp28.3%24.7%16.8%30.2%47.00%−0.284+0.068
COX2Cytochrome c oxidase subunit II684 bp29.5%22.7%15.5%32.3%47.81%−0.352+0.132
ATP8ATP synthase F0 subunit 8168 bp33.3%25.6%7.1%33.9%41.07%−0.652+0.131
ATP6ATP synthase F0 subunit 6684 bp28.8%23.4%10.7%37.1%47.81%−0.554+0.104
COX3Cytochrome c oxidase subunit III784 bp26.4%23.7%16.7%33.2%49.87%−0.330+0.053
ND3NADH dehydrogenase subunit 3351 bp26.2%26.5%14.8%32.2%47.14%−0.370−0.005
ND4LNADH dehydrogenase subunit 4L297 bp25.6%24.2%14.1%36.0%50.17%−0.436+0.027
ND4NADH dehydrogenase subunit 41,380 bp30.9%22.8%11.2%35.1%46.38%−0.516+0.151
ND5NADH dehydrogenase subunit 51,818 bp30.8%22.7%11.7%34.7%46.48%−0.495+0.152
ND6NADH dehydrogenase subunit 6519 bp41.6%11.0%10.0%37.4%47.40%−0.577+0.582
CYTBCytochrome b1,143 bp28.3%24.1%13.0%34.6%47.59%−0.452+0.082
12S rRNA12S ribosomal RNA970 bp30.5%20.0%20.4%29.0%49.43%−0.173+0.208
16S rRNA16S ribosomal RNA1,598 bp34.4%20.7%19.3%25.6%44.87%−0.141+0.249
D-loopControl region (D-loop)1,169 bp25.7%28.8%14.7%30.4%45.28%−0.347−0.058

Codon usage

Counts per codon, darker is more frequent

3,797 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.7%
UUU65
UUC151
Leu L17.4%
UUA53
UUG22
CUU63
CUC137
CUA316
CUG69
Ile I7.5%
AUU72
AUC211
Met M4.4%
AUA137
AUG31
Val V5.3%
GUU27
GUC66
GUA87
GUG23
Ser S7.5%
UCU29
UCC104
UCA83
UCG11
AGU8
AGC50
Pro P5.9%
CCU27
CCC82
CCA107
CCG8
Thr T8.6%
ACU51
ACC138
ACA132
ACG7
Ala A8.1%
GCU57
GCC153
GCA85
GCG11
Tyr Y2.9%
UAU26
UAC83
His H2.6%
CAU20
CAC79
Gln Q2.6%
CAA90
CAG9
Asn N3.5%
AAU19
AAC113
Lys K2.2%
AAA80
AAG3
Asp D1.9%
GAU16
GAC55
Glu E2.3%
GAA72
GAG16
Cys C0.9%
UGU7
UGC26
Trp W2.8%
UGA98
UGG7
Arg R1.9%
CGU9
CGC17
CGA42
CGG4
Gly G5.8%
GGU22
GGC70
GGA90
GGG39
Stop 0.3%
UAA7
UAG2
AGA2
AGG1

Genome map

38 annotated features in NC_027231.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (46.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA17070 bp+–
12S rRNARibosomal RNA711,040970 bp+49.4%
tRNA-ValTransfer RNA1,0511,12070 bp+–
16S rRNARibosomal RNA1,1212,7181,598 bp+44.9%
tRNA-Leu (UUR)Transfer RNA2,7272,80175 bp+–
ND1Protein-coding gene2,8223,799978 bp+45.8%
tRNA-IleTransfer RNA3,8053,87773 bp+–
tRNA-GlnTransfer RNA3,8843,95471 bp−–
tRNA-MetTransfer RNA3,9544,02269 bp+–
ND2Protein-coding gene4,0245,0641,041 bp+44.8%
tRNA-TrpTransfer RNA5,0655,13369 bp+–
tRNA-AlaTransfer RNA5,1355,20369 bp−–
tRNA-AsnTransfer RNA5,2075,27973 bp−–
tRNA-CysTransfer RNA5,2835,34967 bp−–
tRNA-TyrTransfer RNA5,3495,41971 bp−–
COX1Protein-coding gene5,4216,9711,551 bp+47.0%
tRNA-Ser (UCN)Transfer RNA6,9637,03573 bp−–
tRNA-AspTransfer RNA7,0417,10969 bp+–
COX2Protein-coding gene7,1207,803684 bp+47.8%
tRNA-LysTransfer RNA7,8057,87369 bp+–
ATP8Protein-coding gene7,8758,042168 bp+41.1%
ATP6Protein-coding gene8,0338,716684 bp+47.8%
COX3Protein-coding gene8,7239,506784 bp+49.9%
tRNA-GlyTransfer RNA9,5079,57569 bp+–
ND3Protein-coding gene9,5769,926351 bp+47.1%
tRNA-ArgTransfer RNA9,9289,99770 bp+–
ND4LProtein-coding gene9,99910,295297 bp+50.2%
ND4Protein-coding gene10,28911,6681,380 bp+46.4%
tRNA-HisTransfer RNA11,66811,73770 bp+–
tRNA-Ser (AGY)Transfer RNA11,74011,80263 bp+–
tRNA-Leu (CUN)Transfer RNA11,80311,87371 bp+–
ND5Protein-coding gene11,87413,6911,818 bp+46.5%
CYTBProtein-coding gene13,69914,8411,143 bp+47.6%
tRNA-ThrTransfer RNA14,84614,91570 bp+–
tRNA-ProTransfer RNA14,92414,99471 bp−–
ND6Protein-coding gene15,00515,523519 bp−47.4%
tRNA-GluTransfer RNA15,52415,59572 bp−–
D-loopControl region15,59616,7641,169 bp–45.3%

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