MitoAge

Turdus philomelos

Song thrush

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Maximum lifespan
17.7 yr
AnAge record
mtDNA size
18,540 bp
RefSeq NC_029147.1
GC content
46.75%
Whole genome
Non-coding
2,401 bp
D-loop 2,299 bp

Where Song thrush sits among 2,335 species

Whole-genome GC content against maximum lifespan. Song thrush has the 1,065th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Song thrush
  • This species
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Plot other mtDNA features with this species highlighted

Base composition

Whole genome18,540 bp
GC skew (G − C) / (G + C)
−0.356
AT skew (A − T) / (A + T)
+0.091

Life history

Maximum lifespan
17.7 years
Adult weight
67.8 g
Basal metabolic rate
0.726 W
Female sexual maturity
365 days
Male sexual maturity
365 days

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 01304)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome18,540 bp
Protein-coding11,891 bp
12S rRNA974 bp
16S rRNA1,600 bp
All tRNA1,683 bp
D-loop2,299 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1978 bp25.2%25.9%15.5%33.3%48.93%−0.364−0.014
ND2NADH dehydrogenase subunit 21,040 bp28.0%24.2%12.8%35.0%47.79%−0.465+0.072
COX1Cytochrome c oxidase subunit I1,551 bp26.7%24.9%16.8%31.6%48.42%−0.305+0.035
COX2Cytochrome c oxidase subunit II685 bp28.9%23.4%15.5%32.3%47.74%−0.352+0.106
ATP8ATP synthase F0 subunit 8168 bp31.0%26.2%6.0%36.9%42.86%−0.722+0.083
ATP6ATP synthase F0 subunit 6684 bp29.7%24.0%9.6%36.7%46.35%−0.584+0.106
COX3Cytochrome c oxidase subunit III784 bp25.3%25.3%15.7%33.5%49.36%−0.3630.000
ND3NADH dehydrogenase subunit 3351 bp27.1%25.9%14.2%32.8%47.01%−0.394+0.022
ND4LNADH dehydrogenase subunit 4L297 bp26.6%24.6%12.8%36.0%48.82%−0.476+0.039
ND4NADH dehydrogenase subunit 41,378 bp29.0%23.2%11.5%36.4%47.82%−0.520+0.110
ND5NADH dehydrogenase subunit 51,818 bp30.0%23.8%12.0%34.3%46.26%−0.482+0.116
ND6NADH dehydrogenase subunit 6516 bp38.0%10.9%12.0%39.1%51.16%−0.530+0.556
CYTBCytochrome b1,142 bp27.9%25.1%13.8%33.1%46.94%−0.410+0.053
12S rRNA12S ribosomal RNA974 bp30.6%20.9%21.9%26.6%48.46%−0.097+0.187
16S rRNA16S ribosomal RNA1,600 bp34.2%21.0%20.4%24.4%44.81%−0.088+0.239
D-loopControl region (D-loop)2,299 bp23.6%32.3%15.7%28.3%44.10%−0.285−0.156

Codon usage

Counts per codon, darker is more frequent

3,792 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.8%
UUU56
UUC164
Leu L17.7%
UUA59
UUG20
CUU64
CUC160
CUA303
CUG64
Ile I7.6%
AUU85
AUC202
Met M4.0%
AUA113
AUG39
Val V5.0%
GUU34
GUC68
GUA59
GUG30
Ser S7.8%
UCU32
UCC97
UCA95
UCG10
AGU6
AGC56
Pro P5.8%
CCU32
CCC96
CCA87
CCG6
Thr T8.1%
ACU57
ACC134
ACA108
ACG8
Ala A8.5%
GCU51
GCC169
GCA92
GCG12
Tyr Y3.0%
UAU24
UAC90
His H2.7%
CAU19
CAC85
Gln Q2.5%
CAA82
CAG14
Asn N3.3%
AAU20
AAC107
Lys K2.3%
AAA84
AAG4
Asp D1.7%
GAU20
GAC46
Glu E2.3%
GAA72
GAG16
Cys C0.9%
UGU3
UGC30
Trp W2.8%
UGA93
UGG14
Arg R1.9%
CGU8
CGC18
CGA42
CGG3
Gly G5.9%
GGU24
GGC71
GGA83
GGG44
Stop 0.2%
UAA4
UAG1
AGA2
AGG1

Genome map

42 annotated features in NC_029147.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding14
  • rRNA2
  • tRNA24
  • D-loop2
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (46.7%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 42 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA691,042974 bp+48.5%
tRNA-ValTransfer RNA1,0431,11270 bp+–
16S rRNARibosomal RNA1,1132,7121,600 bp+44.8%
tRNA-Leu (UUR)Transfer RNA2,7132,78775 bp+–
ND1Protein-coding gene2,7923,769978 bp+48.9%
tRNA-IleTransfer RNA3,7763,84772 bp+–
tRNA-GlnTransfer RNA3,8553,92571 bp−–
tRNA-MetTransfer RNA3,9253,99369 bp+–
ND2Protein-coding gene3,9945,0331,040 bp+47.8%
tRNA-TrpTransfer RNA5,0345,10370 bp+–
tRNA-AlaTransfer RNA5,1055,17369 bp−–
tRNA-AsnTransfer RNA5,1785,25174 bp−–
tRNA-CysTransfer RNA5,2535,31967 bp−–
tRNA-TyrTransfer RNA5,3195,38971 bp−–
COX1Protein-coding gene5,3916,9411,551 bp+48.4%
tRNA-Ser (UCN)Transfer RNA6,9337,00573 bp−–
tRNA-AspTransfer RNA7,0097,07870 bp+–
COX2Protein-coding gene7,0897,773685 bp+47.7%
tRNA-LysTransfer RNA7,7747,84168 bp+–
ATP8Protein-coding gene7,8438,010168 bp+42.9%
ATP6Protein-coding gene8,0018,684684 bp+46.4%
COX3Protein-coding gene8,6909,473784 bp+49.4%
tRNA-GlyTransfer RNA9,4749,54269 bp+–
ND3Protein-coding gene9,5439,893351 bp+47.0%
tRNA-ArgTransfer RNA9,8959,96470 bp+–
ND4LProtein-coding gene9,96610,262297 bp+48.8%
ND4Protein-coding gene10,25611,6331,378 bp+47.8%
tRNA-HisTransfer RNA11,63411,70370 bp+–
tRNA-Ser (AGY)Transfer RNA11,70411,76865 bp+–
tRNA-Leu (CUN)Transfer RNA11,76911,83971 bp+–
ND5Protein-coding gene11,84013,6571,818 bp+46.3%
CYTBProtein-coding gene13,66614,8071,142 bp+46.9%
tRNA-ThrTransfer RNA14,80814,87669 bp+–
tRNA-ProTransfer RNA14,88914,95870 bp−–
ND6Protein-coding gene14,97715,492516 bp−51.2%
tRNA-GluTransfer RNA15,49415,56572 bp−–
D-loopControl region15,56616,6731,108 bp–44.1%
tRNA-ProTransfer RNA16,67416,74370 bp−–
ND6Protein-coding gene16,76117,276516 bp−51.2%
tRNA-GluTransfer RNA17,27817,34972 bp−–
D-loopControl region17,35018,5401,191 bp–44.1%

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