MitoAge

Vicugna vicugna

Vicugna

Add to compare Download FASTA
Maximum lifespan
31.6 yr
AnAge record
mtDNA size
16,084 bp
RefSeq NC_013558.1
GC content
40.53%
Whole genome
Non-coding
710 bp
D-loop 650 bp

Where Vicugna sits among 2,335 species

Whole-genome GC content against maximum lifespan. Vicugna has the 402nd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Vicugna
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,084 bp
GC skew (G − C) / (G + C)
−0.273
AT skew (A − T) / (A + T)
+0.061

Life history

Maximum lifespan
31.6 years
Adult weight
50 kg
Birth weight
5.7 kg
Body temperature
39.9 °C
Female sexual maturity
2 years
Male sexual maturity
2 years
Gestation or incubation
340 days
Litter or clutch size
1
Litters per year
0.7
Postnatal growth rate
0.0057 per day

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02010)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,084 bp
Protein-coding11,339 bp
12S rRNA968 bp
16S rRNA1,566 bp
All tRNA1,501 bp
D-loop650 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp28.8%29.6%13.1%28.6%41.63%−0.372−0.014
ND2NADH dehydrogenase subunit 21,042 bp35.6%28.3%9.7%26.4%36.08%−0.463+0.114
COX1Cytochrome c oxidase subunit I1,545 bp27.1%30.0%17.9%25.0%42.85%−0.166−0.051
COX2Cytochrome c oxidase subunit II684 bp31.1%29.5%16.2%23.1%39.33%−0.175+0.027
ATP8ATP synthase F0 subunit 8204 bp37.3%27.5%8.3%27.0%35.29%−0.528+0.152
ATP6ATP synthase F0 subunit 6681 bp29.2%30.2%13.4%27.2%40.53%−0.341−0.017
COX3Cytochrome c oxidase subunit III784 bp25.5%30.6%15.9%27.9%43.88%−0.273−0.091
ND3NADH dehydrogenase subunit 3347 bp29.4%32.6%11.5%26.5%38.04%−0.394−0.051
ND4LNADH dehydrogenase subunit 4L297 bp29.6%32.3%12.8%25.3%38.05%−0.327−0.043
ND4NADH dehydrogenase subunit 41,378 bp31.3%28.2%12.0%28.4%40.42%−0.408+0.052
ND5NADH dehydrogenase subunit 51,821 bp30.9%28.2%12.2%28.7%40.91%−0.401+0.046
ND6NADH dehydrogenase subunit 6528 bp40.3%23.3%8.0%28.4%36.36%−0.563+0.268
CYTBCytochrome b1,140 bp29.6%28.5%14.1%27.7%41.84%−0.325+0.020
12S rRNA12S ribosomal RNA968 bp35.0%22.5%19.1%23.3%42.46%−0.100+0.217
16S rRNA16S ribosomal RNA1,566 bp36.0%25.0%18.3%20.6%38.95%−0.059+0.180
D-loopControl region (D-loop)650 bp27.4%27.5%18.0%27.1%45.08%−0.201−0.003

Codon usage

Counts per codon, darker is more frequent

3,800 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.2%
UUU126
UUC108
Leu L15.6%
UUA109
UUG14
CUU70
CUC82
CUA267
CUG51
Ile I8.4%
AUU182
AUC139
Met M6.7%
AUA192
AUG62
Val V5.4%
GUU53
GUC46
GUA80
GUG26
Ser S7.3%
UCU62
UCC67
UCA79
UCG7
AGU24
AGC38
Pro P5.2%
CCU49
CCC79
CCA58
CCG10
Thr T8.2%
ACU74
ACC85
ACA135
ACG19
Ala A6.7%
GCU60
GCC97
GCA88
GCG8
Tyr Y3.7%
UAU65
UAC75
His H2.4%
CAU30
CAC63
Gln Q2.4%
CAA77
CAG15
Asn N3.9%
AAU65
AAC82
Lys K2.6%
AAA83
AAG15
Asp D1.9%
GAU30
GAC41
Glu E2.5%
GAA69
GAG27
Cys C0.6%
UGU8
UGC16
Trp W2.7%
UGA90
UGG14
Arg R1.7%
CGU5
CGC18
CGA40
CGG2
Gly G5.7%
GGU33
GGC61
GGA83
GGG39
Stop 0.2%
UAA6
UAG1
AGA1
AGG0

Genome map

38 annotated features in NC_013558.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (40.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16767 bp+–
12S rRNARibosomal RNA681,035968 bp+42.5%
tRNA-ValTransfer RNA1,0361,10166 bp+–
16S rRNARibosomal RNA1,1022,6671,566 bp+39.0%
tRNA-Leu (UUR)Transfer RNA2,6682,74275 bp+–
ND1Protein-coding gene2,7463,701956 bp+41.6%
tRNA-IleTransfer RNA3,7023,77069 bp+–
tRNA-GlnTransfer RNA3,7683,84073 bp−–
tRNA-MetTransfer RNA3,8423,91069 bp+–
ND2Protein-coding gene3,9114,9521,042 bp+36.1%
tRNA-TrpTransfer RNA4,9535,01967 bp+–
tRNA-AlaTransfer RNA5,0255,09369 bp−–
tRNA-AsnTransfer RNA5,0955,16773 bp−–
tRNA-CysTransfer RNA5,2015,26767 bp−–
tRNA-TyrTransfer RNA5,2685,33467 bp−–
COX1Protein-coding gene5,3366,8801,545 bp+42.9%
tRNA-Ser (UCN)Transfer RNA6,8826,95069 bp+–
tRNA-AspTransfer RNA6,9577,02367 bp+–
COX2Protein-coding gene7,0247,707684 bp+39.3%
tRNA-LysTransfer RNA7,7117,77767 bp+–
ATP8Protein-coding gene7,7797,982204 bp+35.3%
ATP6Protein-coding gene7,9408,620681 bp+40.5%
COX3Protein-coding gene8,6209,403784 bp+43.9%
tRNA-GlyTransfer RNA9,4049,47269 bp+–
ND3Protein-coding gene9,4739,819347 bp+38.0%
tRNA-ArgTransfer RNA9,8209,88768 bp+–
ND4LProtein-coding gene9,88810,184297 bp+38.1%
ND4Protein-coding gene10,17811,5551,378 bp+40.4%
tRNA-HisTransfer RNA11,55611,62469 bp+–
tRNA-Ser (AGY)Transfer RNA11,62511,68460 bp+–
tRNA-Leu (CUN)Transfer RNA11,68511,75470 bp+–
ND5Protein-coding gene11,75513,5751,821 bp+40.9%
ND6Protein-coding gene13,55914,086528 bp−36.4%
tRNA-GluTransfer RNA14,08814,15669 bp−–
CYTBProtein-coding gene14,16115,3001,140 bp+41.8%
tRNA-ThrTransfer RNA15,30115,36969 bp+–
tRNA-ProTransfer RNA15,36915,43466 bp+–
D-loopControl region15,43516,084650 bp–45.1%

Downloads