MitoAge

Zonotrichia albicollis

White-throated sparrow

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Maximum lifespan
14.9 yr
AnAge record
mtDNA size
16,781 bp
RefSeq NC_053110.1
GC content
46.95%
Whole genome
Non-coding
1,300 bp
Including the D-loop

Where White-throated sparrow sits among 2,335 species

Whole-genome GC content against maximum lifespan. White-throated sparrow has the 1,256th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %White-throated sparrow
  • This species
  • Other birds
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,781 bp
GC skew (G − C) / (G + C)
−0.408
AT skew (A − T) / (A + T)
+0.134

Life history

Maximum lifespan
14.9 years
Adult weight
21.1 g
Birth weight
2.8 g
Basal metabolic rate
0.278 W
Female sexual maturity
365 days
Male sexual maturity
365 days
Gestation or incubation
13 days
Litter or clutch size
4
Litters per year
1.5
Postnatal growth rate
0.627 per day

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 01195)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,781 bp
Protein-coding11,380 bp
12S rRNA976 bp
16S rRNA1,599 bp
All tRNA1,538 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1978 bp26.7%24.9%13.9%34.5%48.36%−0.425+0.034
ND2NADH dehydrogenase subunit 21,040 bp30.1%23.8%10.0%36.2%46.15%−0.567+0.118
COX1Cytochrome c oxidase subunit I1,551 bp27.5%24.4%16.5%31.7%48.16%−0.315+0.060
COX2Cytochrome c oxidase subunit II685 bp29.5%22.5%14.2%33.9%48.03%−0.410+0.135
ATP8ATP synthase F0 subunit 8168 bp30.4%25.0%6.5%38.1%44.64%−0.707+0.097
ATP6ATP synthase F0 subunit 6684 bp30.1%22.7%10.2%37.0%47.22%−0.567+0.141
COX3Cytochrome c oxidase subunit III785 bp27.4%23.7%14.8%34.1%48.92%−0.396+0.072
ND3NADH dehydrogenase subunit 3351 bp27.9%23.6%11.7%36.8%48.43%−0.518+0.083
ND4LNADH dehydrogenase subunit 4L297 bp27.9%23.2%11.4%37.4%48.82%−0.531+0.092
ND4NADH dehydrogenase subunit 41,378 bp29.7%21.8%10.6%38.0%48.55%−0.564+0.154
ND5NADH dehydrogenase subunit 51,818 bp31.0%22.1%11.1%35.8%46.92%−0.526+0.169
ND6NADH dehydrogenase subunit 6519 bp38.3%11.4%8.7%41.6%50.29%−0.655+0.543
CYTBCytochrome b1,143 bp26.6%24.1%12.7%36.7%49.34%−0.486+0.050
12S rRNA12S ribosomal RNA976 bp30.6%20.3%21.2%27.9%49.08%−0.136+0.203
16S rRNA16S ribosomal RNA1,599 bp34.5%20.1%19.1%26.2%45.34%−0.156+0.263

Codon usage

Counts per codon, darker is more frequent

3,797 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.8%
UUU38
UUC183
Leu L17.7%
UUA54
UUG20
CUU67
CUC185
CUA316
CUG31
Ile I7.7%
AUU61
AUC230
Met M4.1%
AUA124
AUG33
Val V5.0%
GUU24
GUC74
GUA67
GUG24
Ser S7.6%
UCU35
UCC107
UCA83
UCG5
AGU4
AGC53
Pro P5.9%
CCU23
CCC107
CCA87
CCG6
Thr T8.3%
ACU37
ACC146
ACA128
ACG6
Ala A8.3%
GCU40
GCC168
GCA93
GCG13
Tyr Y2.9%
UAU24
UAC88
His H2.6%
CAU11
CAC89
Gln Q2.4%
CAA85
CAG8
Asn N3.6%
AAU19
AAC119
Lys K2.3%
AAA86
AAG1
Asp D1.7%
GAU7
GAC56
Glu E2.4%
GAA82
GAG10
Cys C0.8%
UGU3
UGC26
Trp W2.8%
UGA101
UGG5
Arg R1.9%
CGU6
CGC22
CGA41
CGG5
Gly G5.8%
GGU21
GGC73
GGA95
GGG33
Stop 0.2%
UAA4
UAG2
AGA2
AGG1

Genome map

37 annotated features in NC_053110.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (46.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA681,043976 bp+49.1%
tRNA-ValTransfer RNA1,0431,11169 bp+–
16S rRNARibosomal RNA1,1122,7101,599 bp+45.3%
tRNA-Leu (UUR)Transfer RNA2,7112,78575 bp+–
ND1Protein-coding gene2,8043,781978 bp+48.4%
tRNA-IleTransfer RNA3,7893,86072 bp+–
tRNA-GlnTransfer RNA3,8663,93671 bp−–
tRNA-MetTransfer RNA3,9364,00469 bp+–
ND2Protein-coding gene4,0055,0441,040 bp+46.2%
tRNA-TrpTransfer RNA5,0455,11470 bp+–
tRNA-AlaTransfer RNA5,1165,18469 bp−–
tRNA-AsnTransfer RNA5,1925,26473 bp−–
tRNA-CysTransfer RNA5,2655,33167 bp−–
tRNA-TyrTransfer RNA5,3325,40170 bp−–
COX1Protein-coding gene5,4036,9531,551 bp+48.2%
tRNA-Ser (UCN)Transfer RNA6,9457,01773 bp−–
tRNA-AspTransfer RNA7,0237,09169 bp+–
COX2Protein-coding gene7,0997,783685 bp+48.0%
tRNA-LysTransfer RNA7,7847,85168 bp+–
ATP8Protein-coding gene7,8538,020168 bp+44.6%
ATP6Protein-coding gene8,0118,694684 bp+47.2%
COX3Protein-coding gene8,7019,485785 bp+48.9%
tRNA-GlyTransfer RNA9,4859,55369 bp+–
ND3Protein-coding gene9,5549,904351 bp+48.4%
tRNA-ArgTransfer RNA9,9069,97570 bp+–
ND4LProtein-coding gene9,97710,273297 bp+48.8%
ND4Protein-coding gene10,26711,6441,378 bp+48.6%
tRNA-HisTransfer RNA11,64511,71470 bp+–
tRNA-Ser (AGY)Transfer RNA11,71511,78066 bp+–
tRNA-Leu (CUN)Transfer RNA11,78011,85071 bp+–
ND5Protein-coding gene11,85113,6681,818 bp+46.9%
CYTBProtein-coding gene13,67714,8191,143 bp+49.3%
tRNA-ThrTransfer RNA14,82314,89169 bp+–
tRNA-ProTransfer RNA14,90714,97771 bp−–
ND6Protein-coding gene14,98715,505519 bp−50.3%
tRNA-GluTransfer RNA15,50815,57871 bp−–

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